RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ADCYAP1R1P41586 468 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 MAN2A2P49641 1150 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 TCEAL8Q8IYN2 117 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 HSD17B11Q8NBQ5 300 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM104Q8NE00 496 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 FAM213BQ8TBF2 198 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ARRDC3Q96B67 414 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 C19orf24Q9BVV8 132 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 A4GNTQ9UNA3 340 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 NKX6-3A6NJ46 265 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 TOX3O15405 576 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 MAS1P04201 325 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 SLC35E2P0CK97 266 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 SDC1P18827 310 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 CD52P31358 61 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 PRAMEF19Q5SWL8 479 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 AADACL2Q6P093 401 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 LYG2Q86SG7 212 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 MFSD4AQ8N468 514 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 OR4B1Q8NGF8 309 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 OR51A7Q8NH64 312 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 MUCL1Q96DR8 90 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 MBOAT4Q96T53 435 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 POFUT1Q9H488 388 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ZDHHC11Q9H8X9 412 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM167BQ9NRX6 74 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 CYSLTR2Q9NS75 346 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 HDGFL3Q9Y3E1 203 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 SIP14410 1827 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 F5H5K5 113 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ISLRO14498 428 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 F7P08709 466 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 GABRB1P18505 474 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 TCN2P20062 427 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ACVR1BP36896 505 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 INPP5JQ15735 1006 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 C18orf21Q32NC0 220 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 RPUSD3Q6P087 351 aaKnown RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ATOH8Q96SQ7 321 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ACPTQ9BZG2 426 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 TMEM191AQ9H0A3 160 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 FZD3Q9NPG1 666 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 NAT8BQ9UHF3 227 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 A0A1W2PN81 502 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 SLC5A10A0PJK1 596 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 CEBPZOSA8MTT3 80 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 CHRNA7P36544 502 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 PIGPP57054 158 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 NCR3LG1Q68D85 454 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 JMJD6Q6NYC1 403 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 SLC24A4Q8NFF2 622 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ZCCHC10Q8TBK6 192 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 LGALS14Q8TCE9 139 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 PDXPQ96GD0 296 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 OR10C1Q96KK4 312 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 AAMDCQ9H7C9 122 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 EMC9Q9Y3B6 208 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 LSM5Q9Y4Y9 91 aaKnown RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 TRAV9-1A0A075B6T8 112 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 A0A0B4J203 849 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 MYBPHLA2RUH7 354 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 CHRM4P08173 479 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 LIPCP11150 499 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 IDUAP35475 653 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ADAMTSL4Q6UY14 1074 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 SPATC1Q76KD6 591 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 NANOGP1Q8N7R0 232 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 RBMXL3Q8N7X1 1067 aaKnown RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF738Q8NE65 137 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 OR4D10Q8NGI6 311 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 IGSF5Q9NSI5 407 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 YIPF1Q9Y548 306 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 GPR31O00270 319 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 SLC17A3O00476 420 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 HSBP1O75506 76 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 VNN1O95497 513 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 SLC6A1P30531 599 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 NPBWR2P48146 333 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 CNN1P51911 297 aaKnown RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ABHD17BQ5VST6 288 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ESPNLQ6ZVH7 1005 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 Q7L0L9 218 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 GRAMD2AQ8IUY3 354 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 CMC2Q9NRP2 79 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 AK3Q9UIJ7 227 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 SLCO2B1O94956 709 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 CDS2O95674 445 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 NME1P15531 152 aaKnown RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ELAVL4P26378 380 aaKnown RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 OR1D4P47884 311 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ISL1P61371 349 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 MAT1AQ00266 395 aaKnown RBP4.79□□□□□ -1.64
CSMD3-204ENST00000455883 CXCL17Q6UXB2 119 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 MAMDC4Q6UXC1 1216 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ZNF429Q86V71 674 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 FAM217AQ8IXS0 508 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 SLC35G3Q8N808 338 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 ABHD4Q8TB40 342 aa4.79□□□□□ -1.64
CSMD3-204ENST00000455883 HMGB4Q8WW32 186 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms