RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 TMEM249Q2WGJ8 235 aa21.26■□□□□ 0.99
MSH2-203ENST00000454849 ZNF718Q3SXZ3 478 aa21.26■□□□□ 0.99
MSH2-203ENST00000454849 ELFN2Q5R3F8 820 aa21.26■□□□□ 0.99
MSH2-203ENST00000454849 ZNF362Q5T0B9 420 aaPredicted RBP21.26■□□□□ 0.99
MSH2-203ENST00000454849 IQCF1Q8N6M8 205 aa21.26■□□□□ 0.99
MSH2-203ENST00000454849 SLC26A10Q8NG04 563 aa21.26■□□□□ 0.99
MSH2-203ENST00000454849 OR9Q1Q8NGQ5 310 aa21.26■□□□□ 0.99
MSH2-203ENST00000454849 OR1F12Q8NHA8 337 aa21.26■□□□□ 0.99
MSH2-203ENST00000454849 KLF14Q8TD94 323 aaPredicted RBP21.26■□□□□ 0.99
MSH2-203ENST00000454849 SLCO4A1Q96BD0 722 aa21.26■□□□□ 0.99
MSH2-203ENST00000454849 PDP1Q9P0J1 537 aaPredicted RBP21.26■□□□□ 0.99
MSH2-203ENST00000454849 NDRG4Q9ULP0 352 aaKnown RBP21.26■□□□□ 0.99
MSH2-203ENST00000454849 NAV3Q8IVL0 2385 aa21.25■□□□□ 0.99
MSH2-203ENST00000454849 TCRBV3S1A0A5B6 114 aa21.25■□□□□ 0.99
MSH2-203ENST00000454849 TVP23AA6NH52 213 aa21.25■□□□□ 0.99
MSH2-203ENST00000454849 FKBP6O75344 327 aa21.25■□□□□ 0.99
MSH2-203ENST00000454849 GCH1P30793 250 aa21.25■□□□□ 0.99
MSH2-203ENST00000454849 CCL8P80075 99 aa21.25■□□□□ 0.99
MSH2-203ENST00000454849 CBX1P83916 185 aa21.25■□□□□ 0.99
MSH2-203ENST00000454849 CHD3Q12873 2000 aaKnown RBP21.25■□□□□ 0.99
MSH2-203ENST00000454849 RPL13AP3Q6NVV1 102 aa21.25■□□□□ 0.99
MSH2-203ENST00000454849 LYPD4Q6UWN0 246 aa21.25■□□□□ 0.99
MSH2-203ENST00000454849 ZBTB46Q86UZ6 589 aa21.25■□□□□ 0.99
MSH2-203ENST00000454849 ZNF786Q8N393 782 aa21.25■□□□□ 0.99
MSH2-203ENST00000454849 SLC37A3Q8NCC5 494 aa21.25■□□□□ 0.99
MSH2-203ENST00000454849 DDOQ99489 341 aa21.25■□□□□ 0.99
MSH2-203ENST00000454849 RACGAP1Q9H0H5 632 aa21.25■□□□□ 0.99
MSH2-203ENST00000454849 STARD10Q9Y365 291 aa21.25■□□□□ 0.99
MSH2-203ENST00000454849 LRP5LA4QPB2 252 aa21.24■□□□□ 0.99
MSH2-203ENST00000454849 OR6C6A6NF89 314 aa21.24■□□□□ 0.99
MSH2-203ENST00000454849 E2F6O75461 281 aa21.24■□□□□ 0.99
MSH2-203ENST00000454849 GYPBP06028 91 aa21.24■□□□□ 0.99
MSH2-203ENST00000454849 GSTM3P21266 225 aa21.24■□□□□ 0.99
MSH2-203ENST00000454849 RPS27P42677 84 aaKnown RBP21.24■□□□□ 0.99
MSH2-203ENST00000454849 PPP2R2BQ00005 443 aa21.24■□□□□ 0.99
MSH2-203ENST00000454849 TSTQ16762 297 aaKnown RBP21.24■□□□□ 0.99
MSH2-203ENST00000454849 SLC36A3Q495N2 470 aa21.24■□□□□ 0.99
MSH2-203ENST00000454849 PROKR2Q8NFJ6 384 aa21.24■□□□□ 0.99
MSH2-203ENST00000454849 SNX33Q8WV41 574 aa21.24■□□□□ 0.99
MSH2-203ENST00000454849 SNX18Q96RF0 628 aa21.24■□□□□ 0.99
MSH2-203ENST00000454849 WACQ9BTA9 647 aa21.24■□□□□ 0.99
MSH2-203ENST00000454849 ELOVL3Q9HB03 270 aa21.24■□□□□ 0.99
MSH2-203ENST00000454849 MYOZ1Q9NP98 299 aaPredicted RBP21.24■□□□□ 0.99
MSH2-203ENST00000454849 MRPL22Q9NWU5 206 aaKnown RBP21.24■□□□□ 0.99
MSH2-203ENST00000454849 SLCO1C1Q9NYB5 712 aa21.24■□□□□ 0.99
MSH2-203ENST00000454849 ABCA2Q9BZC7 2435 aa21.24■□□□□ 0.99
MSH2-203ENST00000454849 C17orf100A8MU93 164 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 NDUFS8O00217 210 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 SPRY3O43610 288 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 CD5LO43866 347 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 CDC14BO60729 498 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 IGHV3-13P01766 116 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 COX5BP10606 129 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 POU1F1P28069 291 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 ARHGDIAP52565 204 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 CRMP1Q14194 572 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 TRIP10Q15642 601 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 CFAP77Q6ZQR2 320 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 LNX2Q8N448 690 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 YIPF5Q969M3 257 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 CDADC1Q9BWV3 514 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 GPR160Q9UJ42 338 aa21.23■□□□□ 0.99
MSH2-203ENST00000454849 H3BN98 237 aa21.22■□□□□ 0.99
MSH2-203ENST00000454849 TPD52L2O43399 206 aaKnown RBP21.22■□□□□ 0.99
MSH2-203ENST00000454849 TIPRLO75663 272 aa21.22■□□□□ 0.99
MSH2-203ENST00000454849 IGHV4-31P0DP07 118 aa21.22■□□□□ 0.99
MSH2-203ENST00000454849 CLUP10909 449 aa21.22■□□□□ 0.99
MSH2-203ENST00000454849 HNRNPA0Q13151 305 aaKnown RBP21.22■□□□□ 0.99
MSH2-203ENST00000454849 ARL9Q6T311 187 aa21.22■□□□□ 0.99
MSH2-203ENST00000454849 GJC3Q8NFK1 279 aa21.22■□□□□ 0.99
MSH2-203ENST00000454849 MED20Q9H944 212 aa21.22■□□□□ 0.99
MSH2-203ENST00000454849 PSKH1P11801 424 aa21.21■□□□□ 0.99
MSH2-203ENST00000454849 GGT2P36268 569 aa21.21■□□□□ 0.99
MSH2-203ENST00000454849 ZNF81P51508 661 aa21.21■□□□□ 0.99
MSH2-203ENST00000454849 MBNL2Q5VZF2 373 aaKnown RBP21.21■□□□□ 0.99
MSH2-203ENST00000454849 SLC18B1Q6NT16 456 aa21.21■□□□□ 0.99
MSH2-203ENST00000454849 UNQ6126/PRO20091Q6UXV3 157 aa21.21■□□□□ 0.99
MSH2-203ENST00000454849 OR2T33Q8NG76 320 aa21.21■□□□□ 0.99
MSH2-203ENST00000454849 TEX47Q8TBZ9 253 aa21.21■□□□□ 0.99
MSH2-203ENST00000454849 OTULINQ96BN8 352 aa21.21■□□□□ 0.99
MSH2-203ENST00000454849 PITX2Q99697 317 aa21.21■□□□□ 0.99
MSH2-203ENST00000454849 NARFLQ9H6Q4 476 aa21.21■□□□□ 0.99
MSH2-203ENST00000454849 MSL2Q9HCI7 577 aa21.21■□□□□ 0.99
MSH2-203ENST00000454849 TREM2Q9NZC2 230 aa21.21■□□□□ 0.99
MSH2-203ENST00000454849 YLPM1P49750 1951 aaKnown RBP21.2■□□□□ 0.98
MSH2-203ENST00000454849 ZSCAN5BA6NJL1 495 aa21.2■□□□□ 0.98
MSH2-203ENST00000454849 ZNF16P17020 682 aaPredicted RBP21.2■□□□□ 0.98
MSH2-203ENST00000454849 GIFP27352 417 aa21.2■□□□□ 0.98
MSH2-203ENST00000454849 IL2RGP31785 369 aa21.2■□□□□ 0.98
MSH2-203ENST00000454849 RBMXP38159 391 aaKnown RBP21.2■□□□□ 0.98
MSH2-203ENST00000454849 HIST1H3AP68431 136 aa21.2■□□□□ 0.98
MSH2-203ENST00000454849 COX10Q12887 443 aa21.2■□□□□ 0.98
MSH2-203ENST00000454849 PSG7Q13046 419 aa21.2■□□□□ 0.98
MSH2-203ENST00000454849 RIN1Q13671 783 aa21.2■□□□□ 0.98
MSH2-203ENST00000454849 HLXQ14774 488 aaPredicted RBP21.2■□□□□ 0.98
MSH2-203ENST00000454849 RSPO1Q2MKA7 263 aaPredicted RBP21.2■□□□□ 0.98
MSH2-203ENST00000454849 HIST2H3PS2Q5TEC6 136 aa21.2■□□□□ 0.98
MSH2-203ENST00000454849 HIST2H3AQ71DI3 136 aa21.2■□□□□ 0.98
MSH2-203ENST00000454849 ZNF511Q8NB15 262 aa21.2■□□□□ 0.98
MSH2-203ENST00000454849 PAPD5Q8NDF8 572 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms