RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 ZNF544Q6NX49 715 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 VHLLQ6RSH7 139 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 CFAP77Q6ZQR2 320 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 SLC16A9Q7RTY1 509 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 DPY19L4Q7Z388 723 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 C1orf174Q8IYL3 243 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 THEM6Q8WUY1 208 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 C4orf45Q96LM5 186 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 Q96MT0 163 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 ZNF582Q96NG8 517 aaPredicted RBP12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 DCLRE1CQ96SD1 692 aaKnown RBP12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 COQ7Q99807 217 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 ATF6BQ99941 703 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 LIME1Q9H400 295 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 CA10Q9NS85 328 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 CENPMQ9NSP4 180 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 CLN6Q9NWW5 311 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 WARS2Q9UGM6 360 aaKnown RBP12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 ADGRG4Q8IZF6 3080 aa12.63□□□□□ -0.39
NCKIPSD-207ENST00000453349 USP9YO00507 2555 aaPredicted RBP12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 CCDC182A6NF36 153 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 SELENOFO60613 162 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 RAF1P04049 648 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 LCKP06239 509 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 FAM157BP0CG42 384 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 DNASE1P24855 282 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 HTR1FP30939 366 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 TTKP33981 857 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 THBS4P35443 961 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 GLRXP35754 106 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 ATP6V1E1P36543 226 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 NUDT6P53370 316 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 POU4F2Q12837 409 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 OCLNQ16625 522 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 AGAP6Q5VW22 663 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 PAQR4Q8N4S7 273 aaPredicted RBP12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 ZNF454Q8N9F8 522 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 NRG4Q8WWG1 115 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 IPCEF1Q8WWN9 437 aaPredicted RBP12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 NRGNQ92686 78 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 SLAMF6Q96DU3 332 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 MAP6Q96JE9 813 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 BCL2L14Q9BZR8 327 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 YIPF3Q9GZM5 350 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 ZNF442Q9H7R0 627 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 HAO2Q9NYQ3 351 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 DNAJC27Q9NZQ0 273 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 ST6GALNAC2Q9UJ37 374 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 GRIP1Q9Y3R0 1128 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 CMAHPQ9Y471 501 aa12.62□□□□□ -0.39
NCKIPSD-207ENST00000453349 ZNF878C9JN71 531 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 H0YAE9 185 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 H0YJX3 145 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 ABHD16AO95870 558 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 LYNP07948 512 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 MRPL3P09001 348 aaKnown RBP12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 SERPINF1P36955 418 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 CAPGP40121 348 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 NAA10P41227 235 aaPredicted RBP12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 SLC15A1P46059 708 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 ADARB1P78563 741 aaKnown RBP12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 IL5RAQ01344 420 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 GGTLC2Q14390 218 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 RGS7BPQ6MZT1 257 aaPredicted RBP12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 PAMR1Q6UXH9 720 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 RHOUQ7L0Q8 258 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 ENTHD1Q8IYW4 607 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 MUC15Q8N387 334 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 SETD9Q8NE22 299 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 OR1J1Q8NGS3 322 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 RHOXF1Q8NHV9 184 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 OTOSQ8NHW6 89 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 PIGTQ969N2 578 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 SPTSSAQ969W0 71 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 CNN2Q99439 309 aaKnown RBP12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 MNTQ99583 582 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 CCL19Q99731 98 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 ABHD6Q9BV23 337 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 OR51B6Q9H340 312 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 LAMP5Q9UJQ1 280 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 LAMP3Q9UQV4 416 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 TMEM14AQ9Y6G1 99 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 BAHCC1Q9P281 2608 aa12.61□□□□□ -0.39
NCKIPSD-207ENST00000453349 LRRK2Q5S007 2527 aa12.6□□□□□ -0.39
NCKIPSD-207ENST00000453349 F5H5K5 113 aa12.6□□□□□ -0.39
NCKIPSD-207ENST00000453349 ENTPD6O75354 484 aa12.6□□□□□ -0.39
NCKIPSD-207ENST00000453349 OR4A8P0C604 315 aa12.6□□□□□ -0.39
NCKIPSD-207ENST00000453349 PSKH1P11801 424 aa12.6□□□□□ -0.39
NCKIPSD-207ENST00000453349 BMP4P12644 408 aa12.6□□□□□ -0.39
NCKIPSD-207ENST00000453349 TUBG1P23258 451 aa12.6□□□□□ -0.39
NCKIPSD-207ENST00000453349 RGS6P49758 472 aa12.6□□□□□ -0.39
NCKIPSD-207ENST00000453349 HCCSP53701 268 aa12.6□□□□□ -0.39
NCKIPSD-207ENST00000453349 TPTEP56180 551 aa12.6□□□□□ -0.39
NCKIPSD-207ENST00000453349 SELENOVP59797 346 aa12.6□□□□□ -0.39
NCKIPSD-207ENST00000453349 GRB2P62993 217 aaKnown RBP12.6□□□□□ -0.39
NCKIPSD-207ENST00000453349 NKX6-1P78426 367 aaPredicted RBP12.6□□□□□ -0.39
NCKIPSD-207ENST00000453349 IL18R1Q13478 541 aa12.6□□□□□ -0.39
NCKIPSD-207ENST00000453349 ZNF691Q5VV52 312 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms