RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 PTP4A1Q93096 173 aa11.95□□□□□ -0.5
LYSMD3-202ENST00000453259 TAMM41Q96BW9 452 aa11.95□□□□□ -0.5
LYSMD3-202ENST00000453259 OR8B2Q96RD0 313 aa11.95□□□□□ -0.5
LYSMD3-202ENST00000453259 KAT8Q9H7Z6 458 aaKnown RBP11.95□□□□□ -0.5
LYSMD3-202ENST00000453259 TMEM165Q9HC07 324 aa11.95□□□□□ -0.5
LYSMD3-202ENST00000453259 C1RLQ9NZP8 487 aa11.95□□□□□ -0.5
LYSMD3-202ENST00000453259 MED31Q9Y3C7 131 aa11.95□□□□□ -0.5
LYSMD3-202ENST00000453259 IGKV1D-43A0A0B4J1Z2 117 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 ENSAO43768 121 aaKnown RBP11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 LIPFP07098 398 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 PITPNBP48739 271 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 NPY4RP50391 375 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 ENDOGQ14249 297 aaKnown RBP11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 HLXQ14774 488 aaPredicted RBP11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 DEFB112Q30KQ8 113 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 ZNF404Q494X3 552 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 FIP1L1Q6UN15 594 aaKnown RBP11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 ZNF620Q6ZNG0 422 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 DHDDSQ86SQ9 333 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 OR5L1Q8NGL2 311 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 MOSPD2Q8NHP6 518 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 PFN4Q8NHR9 129 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 TBC1D15Q8TC07 691 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 ERGIC1Q969X5 290 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 RASD2Q96D21 266 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 CMBLQ96DG6 245 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 CGREF1Q99674 301 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 PKP2Q99959 881 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 RBM4BQ9BQ04 359 aaKnown RBP11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 NUDT16L1Q9BRJ7 211 aaKnown RBP11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 POLE4Q9NR33 117 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 CLN8Q9UBY8 286 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 NDUFAF1Q9Y375 327 aa11.94□□□□□ -0.5
LYSMD3-202ENST00000453259 A0A1W2PPL8 197 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 SGCEO43556 437 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 DOK2O60496 412 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 CLPXO76031 633 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 IFNA14P01570 189 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 IFNA8P32881 189 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 HTR5AP47898 357 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 IDH3AP50213 366 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 AQP6Q13520 282 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 TAF9Q16594 264 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 C11orf91Q3C1V1 193 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 AGKQ53H12 422 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 CD276Q5ZPR3 534 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 FBXW12Q6X9E4 464 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 DCDC5Q6ZRR9 648 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 RHOUQ7L0Q8 258 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 FITM2Q8N6M3 262 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 CELF2-AS1Q8N7Q2 184 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 FAM156AQ8NDB6 213 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 OR8G5Q8NG78 346 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 LRRC8CQ8TDW0 803 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 TMEM255BQ8WV15 326 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 C10orf82Q8WW14 230 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 MEGF10Q96KG7 1140 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 C20orf141Q9NUB4 165 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 RIMS3Q9UJD0 308 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 BOLA1Q9Y3E2 137 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 WNK1Q9H4A3 2382 aa11.93□□□□□ -0.5
LYSMD3-202ENST00000453259 IGHV3OR16-10A0A075B7F0 116 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 A0A1B0GWJ7 208 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 SLC22A31A6NKX4 558 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 P2RY10O00398 339 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 TNFRSF13BO14836 293 aaPredicted RBP11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 ANGPT2O15123 496 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 SELEP16581 610 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 GATA4P43694 442 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 MTPNP58546 118 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 RELBQ01201 579 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 LAPTM4AQ15012 233 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 KCNJ8Q15842 424 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 VMACQ2NL98 169 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 FBLN7Q53RD9 439 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 NKAIN4Q8IVV8 208 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 ATG16L2Q8NAA4 619 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 ZNF582Q96NG8 517 aaPredicted RBP11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 SH3GL1Q99961 368 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 TMEM246Q9BRR3 403 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 CHIAQ9BZP6 476 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 SH3GLB1Q9Y371 365 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 RNF114Q9Y508 228 aa11.92□□□□□ -0.5
LYSMD3-202ENST00000453259 MDFIC2A0A1B0GVS7 189 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 MELTFP08582 738 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 IRF2P14316 349 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 SLC9A3P48764 834 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 FGF12P61328 243 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 LSM6P62312 80 aaKnown RBP11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 ST3GAL3Q11203 375 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 TOP3AQ13472 1001 aaPredicted RBP11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 ASPHD2Q6ICH7 369 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 BRD3OSQ6XYD6 125 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 VASH1Q7L8A9 365 aaPredicted RBP11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 Q8TCH9 128 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 GATAD2BQ8WXI9 593 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 LRTOMTQ8WZ04 291 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 BPIFA2Q96DR5 249 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 PARD6BQ9BYG5 372 aa11.91□□□□□ -0.5
LYSMD3-202ENST00000453259 TRIM15Q9C019 465 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms