RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 NSMCE2Q96MF7 247 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 TSSK2Q96PF2 358 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 LRRC37BQ96QE4 947 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 CDRT15Q96T59 188 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 RERGLQ9H628 205 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 ZNF665Q9H7R5 613 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 MSL2Q9HCI7 577 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 IL1RAPQ9NPH3 570 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 PLEK2Q9NYT0 353 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 ATPIF1Q9UII2 106 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 ZDHHC8Q9ULC8 765 aa10.58□□□□□ -0.72
CPSF4-208ENST00000452047 IGLV1-36A0A0B4J1U3 117 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 TRAV20A0A0B4J274 112 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 ARPC3O15145 178 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 RER1O15258 196 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 PPP1R3DO95685 299 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 GPANK1O95872 356 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 IGHV2-5P01817 119 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 FABP3P05413 133 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 GSTM3P21266 225 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 TUBG1P23258 451 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 SRP14P37108 136 aaKnown RBP10.57□□□□□ -0.72
CPSF4-208ENST00000452047 GSSP48637 474 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 HIST1H3AP68431 136 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 CDK5R2Q13319 367 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 RFX4Q33E94 735 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 SPATS1Q496A3 300 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 ZMAT1Q5H9K5 638 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 MTX3Q5HYI7 312 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 HIST2H3PS2Q5TEC6 136 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 HIST2H3AQ71DI3 136 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 OR1F12Q8NHA8 337 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 CCL17Q92583 94 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 ERMAPQ96PL5 475 aaPredicted RBP10.57□□□□□ -0.72
CPSF4-208ENST00000452047 DIRC2Q96SL1 478 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 C19orf24Q9BVV8 132 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 REPIN1Q9BWE0 567 aaKnown RBP10.57□□□□□ -0.72
CPSF4-208ENST00000452047 EGLN1Q9GZT9 426 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 OR52D1Q9H346 318 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 G6PC2Q9NQR9 355 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 TUBG2Q9NRH3 451 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 PURGQ9UJV8 347 aaKnown RBP10.57□□□□□ -0.72
CPSF4-208ENST00000452047 STARD10Q9Y365 291 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 LHFPL6Q9Y693 200 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 DYSFO75923 2080 aa10.57□□□□□ -0.72
CPSF4-208ENST00000452047 TENM1Q9UKZ4 2725 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 J3QW42 95 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 TIMM8AO60220 97 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-208ENST00000452047 OR10H3O60404 316 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 DCTN3O75935 186 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 DBHP09172 617 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 HIST1H1CP16403 213 aaKnown RBP10.56□□□□□ -0.72
CPSF4-208ENST00000452047 KITLGP21583 273 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 CRABP1P29762 137 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 RRM2P31350 389 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 SLC6A6P31641 620 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 ERFP50548 548 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 DBPQ10586 325 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-208ENST00000452047 HNRNPA0Q13151 305 aaKnown RBP10.56□□□□□ -0.72
CPSF4-208ENST00000452047 MEP1BQ16820 701 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 ACSM5Q6NUN0 579 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 C1orf94Q6P1W5 598 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 PGM2L1Q6PCE3 622 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 C16orf89Q6UX73 402 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 ZNF620Q6ZNG0 422 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 Q6ZR03 302 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 C1orf229Q6ZS94 237 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-208ENST00000452047 DEFB107AQ8IZN7 70 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 OR6V1Q8N148 313 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 RFLNBQ8N5W9 214 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 SLC26A10Q8NG04 563 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 RAB1CQ92928 201 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 MCUR1Q96AQ8 359 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 RAB39BQ96DA2 213 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 TIMD4Q96H15 378 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 NMNAT3Q96T66 252 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 DCAF16Q9NXF7 216 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 NDE1Q9NXR1 346 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 GRIP1Q9Y3R0 1128 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 WNK2Q9Y3S1 2297 aa10.56□□□□□ -0.72
CPSF4-208ENST00000452047 PNPP00491 289 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 ANPEPP15144 967 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 ATP6V1B2P21281 511 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 TNFAIP6P98066 277 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-208ENST00000452047 SLC3A1Q07837 685 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 COX10Q12887 443 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 TSPAN31Q12999 210 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 PGBD2Q6P3X8 592 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 LEG1Q6P5S2 330 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 DNM1P34Q6PK57 102 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 ZBTB46Q86UZ6 589 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 ZDHHC21Q8IVQ6 265 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 GJC3Q8NFK1 279 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 OR4K13Q8NH42 304 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 HAVCR1Q96D42 359 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 CMBLQ96DG6 245 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 SAMD8Q96LT4 415 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 COG8Q96MW5 612 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 COQ7Q99807 217 aa10.55□□□□□ -0.72
CPSF4-208ENST00000452047 HDHD2Q9H0R4 259 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms