RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 LPAR3Q9UBY5 353 aa8.25□□□□□ -1.09
USP54-207ENST00000451492 U3KQV3 271 aa8.25□□□□□ -1.09
USP54-207ENST00000451492 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.25□□□□□ -1.095e-7■■■■■ 31
USP54-207ENST00000451492 TCRBV5S2A0A599 114 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 RNF212BA8MTL3 300 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 FAM157AC9JC47 383 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 CLDN25C9JDP6 229 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 DYNC1I1O14576 645 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 RP2O75695 350 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 CCNB2O95067 398 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 SOX14O95416 240 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 GAAP10253 952 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 GSTM3P21266 225 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 CALB2P22676 271 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 CRABP1P29762 137 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 IFNGR2P38484 337 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 RPS27P42677 84 aaKnown RBP8.24□□□□□ -1.09
USP54-207ENST00000451492 ERFP50548 548 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 MMP15P51511 669 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 MNAT1P51948 309 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 CDH15P55291 814 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 PRSS12P56730 875 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.24□□□□□ -1.09
USP54-207ENST00000451492 TSPAN31Q12999 210 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 MOGQ16653 247 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 PCGF3Q3KNV8 242 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 CCDC92Q53HC0 331 aaPredicted RBP8.24□□□□□ -1.09
USP54-207ENST00000451492 SPRNQ5BIV9 151 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 MBNL2Q5VZF2 373 aaKnown RBP8.24□□□□□ -1.09
USP54-207ENST00000451492 ARL9Q6T311 187 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 ZNF620Q6ZNG0 422 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 CXXC5Q7LFL8 322 aaKnown RBP8.24□□□□□ -1.09
USP54-207ENST00000451492 SYT9Q86SS6 491 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 DHFR2Q86XF0 187 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 CYB561A3Q8NBI2 242 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 OR52E2Q8NGJ4 325 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 CCL17Q92583 94 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 LRGUKQ96M69 825 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 PLA2G12AQ9BZM1 189 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 WDR76Q9H967 626 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 TMEM160Q9NX00 188 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 VNN3Q9NY84 501 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 ACTR3BQ9P1U1 418 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 B9D1Q9UPM9 204 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 STARD10Q9Y365 291 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 LYVE1Q9Y5Y7 322 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 LHFPL6Q9Y693 200 aa8.24□□□□□ -1.09
USP54-207ENST00000451492 IGLV1-36A0A0B4J1U3 117 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 TVP23AA6NH52 213 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 AHCYL1O43865 530 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 TXNDC12O95881 172 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 COX5BP10606 129 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 PYCR1P32322 319 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 SRP14P37108 136 aaKnown RBP8.23□□□□□ -1.09
USP54-207ENST00000451492 CRYBB2P43320 205 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 GSSP48637 474 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 LSM6P62312 80 aaKnown RBP8.23□□□□□ -1.09
USP54-207ENST00000451492 TEKQ02763 1124 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 PSG7Q13046 419 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 HLXQ14774 488 aaPredicted RBP8.23□□□□□ -1.09
USP54-207ENST00000451492 HFEQ30201 348 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 MTX3Q5HYI7 312 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 LYPD4Q6UWN0 246 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 CFAP77Q6ZQR2 320 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 GLCCI1Q86VQ1 547 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 OR6V1Q8N148 313 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 AQP11Q8NBQ7 271 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 NPEPL1Q8NDH3 523 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 BHLHE23Q8NDY6 225 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 PROKR2Q8NFJ6 384 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 OR2Z1Q8NG97 314 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 OR51L1Q8NGJ5 315 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 OR8D4Q8NGM9 314 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 OR9Q1Q8NGQ5 310 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 OR1F12Q8NHA8 337 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 HPS1Q92902 700 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 ELMOD3Q96FG2 381 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 CDADC1Q9BWV3 514 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 ARMC1Q9NVT9 282 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 UBAP1Q9NZ09 502 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 CDH10Q9Y6N8 788 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 JMJD1CQ15652 2540 aa8.23□□□□□ -1.09
USP54-207ENST00000451492 IGHV3-64DA0A0J9YX35 117 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 OR6C68A6NDL8 312 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 OR6C6A6NF89 314 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 PHF1O43189 567 aaPredicted RBP8.22□□□□□ -1.09
USP54-207ENST00000451492 GASTP01350 101 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 TFP02787 698 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 GYPBP06028 91 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 T-ENOLP0DO92 83 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 TNFAIP6P98066 277 aaPredicted RBP8.22□□□□□ -1.09
USP54-207ENST00000451492 MS4A2Q01362 244 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 TRIM25Q14258 630 aaKnown RBP8.22□□□□□ -1.09
USP54-207ENST00000451492 FAM98BQ52LJ0 330 aaKnown RBP8.22□□□□□ -1.09
USP54-207ENST00000451492 LCN8Q6JVE9 175 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 GJC3Q8NFK1 279 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 OR10AD1Q8NGE0 317 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 OR2AJ1Q8NGZ0 328 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 CMBLQ96DG6 245 aa8.22□□□□□ -1.09
USP54-207ENST00000451492 DCLRE1CQ96SD1 692 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms