RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 ARR3P36575 388 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 CDH15P55291 814 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 LSM6P62312 80 aaKnown RBP11.33□□□□□ -0.6
VPS33A-202ENST00000451053 BSPH1Q075Z2 132 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 SPOCK1Q08629 439 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 RAB39AQ14964 217 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 TBCEQ15813 527 aaPredicted RBP11.33□□□□□ -0.6
VPS33A-202ENST00000451053 BEX5Q5H9J7 111 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 NCMAPQ5T1S8 102 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 TMEM53Q6P2H8 277 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 TMEM154Q6P9G4 183 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 SHFQ7M4L6 423 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 DPPA2Q7Z7J5 298 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 ERI1Q8IV48 349 aaKnown RBP11.33□□□□□ -0.6
VPS33A-202ENST00000451053 LINC00346Q8IVM7 164 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 SLC35F2Q8IXU6 374 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 OR10H4Q8NGA5 316 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 OR4F15Q8NGB8 312 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 FCGR1BQ92637 280 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 MARVELD3Q96A59 401 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 PIK3IP1Q96FE7 263 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 MS4A3Q96HJ5 214 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 HS3ST6Q96QI5 342 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 SIGLEC11Q96RL6 698 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 OR2H1Q9GZK4 316 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 WNT5BQ9H1J7 359 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 KCNN2Q9H2S1 579 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 NGBQ9NPG2 151 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 ASH2LQ9UBL3 628 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 ERGIC3Q9Y282 383 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 POLR1DQ9Y2S0 133 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 LHFPL6Q9Y693 200 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 DAPL1A0PJW8 107 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 ZNF670-ZNF695F2Z2N8 137 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 J3QRE1 110 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 MYL12BO14950 172 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 SELENOFO60613 162 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 MT-ND2P03891 347 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 HTR1AP08908 422 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 MRPL3P09001 348 aaKnown RBP11.32□□□□□ -0.6
VPS33A-202ENST00000451053 CECR9P0C854 216 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 ZNF14P17017 642 aaPredicted RBP11.32□□□□□ -0.6
VPS33A-202ENST00000451053 CD40P25942 277 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 NAA10P41227 235 aaPredicted RBP11.32□□□□□ -0.6
VPS33A-202ENST00000451053 RPS27P42677 84 aaKnown RBP11.32□□□□□ -0.6
VPS33A-202ENST00000451053 ENTPD1P49961 510 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 PCBD1P61457 104 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 ADAM8P78325 824 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 PSG4Q00888 419 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 AQP6Q13520 282 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 PABPC1L2AQ5JQF8 200 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 TEX30Q5JUR7 227 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 ZNF774Q6NX45 483 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 CORO6Q6QEF8 472 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 ZNF584Q8IVC4 421 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 TIGD4Q8IY51 512 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 SPARTQ8N0X7 666 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 FAM169BQ8N8A8 192 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 ZNF454Q8N9F8 522 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 OR6N2Q8NGY6 317 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 AKR7LQ8NHP1 331 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 MND1Q9BWT6 205 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 ESRP2Q9H6T0 727 aaKnown RBP11.32□□□□□ -0.6
VPS33A-202ENST00000451053 TIMM10BQ9Y5J6 103 aa11.32□□□□□ -0.6
VPS33A-202ENST00000451053 SPTAN1Q13813 2472 aaKnown RBP11.32□□□□□ -0.6
VPS33A-202ENST00000451053 TMEM129A0AVI4 362 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 FAM221AA4D161 298 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 RER1O15258 196 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 APOL3O95236 402 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 PLAUP00749 431 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 PAX7P23759 505 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 C21orf33P30042 268 aaPredicted RBP11.31□□□□□ -0.6
VPS33A-202ENST00000451053 NR1H2P55055 460 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 ACTA2P62736 377 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 ACTG2P63267 376 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 HIST1H3AP68431 136 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 IRF3Q14653 427 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 C3orf36Q3SXR2 165 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 HIST2H3PS2Q5TEC6 136 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 SLC18B1Q6NT16 456 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 TMEM108Q6UXF1 575 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 TMPRSS11AQ6ZMR5 421 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 HIST2H3AQ71DI3 136 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 SYT9Q86SS6 491 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 EGFL6Q8IUX8 553 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 KLHL36Q8N4N3 616 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 CPEB3Q8NE35 698 aaKnown RBP11.31□□□□□ -0.6
VPS33A-202ENST00000451053 SGCDQ92629 289 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 WACQ9BTA9 647 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 CDADC1Q9BWV3 514 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 MOV10Q9HCE1 1003 aaKnown RBP11.31□□□□□ -0.6
VPS33A-202ENST00000451053 ERVK13-1Q9NX77 482 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 CYB5R1Q9UHQ9 305 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 LAMP5Q9UJQ1 280 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 COL12A1Q99715 3063 aa11.31□□□□□ -0.6
VPS33A-202ENST00000451053 A0A1W2PPR1 153 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 ZNF593O00488 134 aaPredicted RBP11.3□□□□□ -0.6
VPS33A-202ENST00000451053 ABCD4O14678 606 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 SGCEO43556 437 aa11.3□□□□□ -0.6
VPS33A-202ENST00000451053 DOK2O60496 412 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms