RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 E9PQ18 207 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 RER1O15258 196 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 GLCEO94923 617 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 GYPBP06028 91 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 CLUP10909 449 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 SLC2A5P22732 501 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 TUBG1P23258 451 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 EPHA2P29317 976 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 FMO3P31513 532 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 HTR5AP47898 357 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 PPOXP50336 477 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 SNRPD2P62316 118 aaKnown RBP12.35□□□□□ -0.43
COL3A1-203ENST00000450867 ADAM8P78325 824 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 TMEM236Q5W0B7 351 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 OTPQ5XKR4 325 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 C12orf73Q69YU5 71 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 UNQ6126/PRO20091Q6UXV3 157 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 DNM1P46Q6ZS02 220 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 ZNF101Q8IZC7 436 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 PQLC1Q8N2U9 271 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 ICA1LQ8NDH6 482 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 OR1F12Q8NHA8 337 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 PERPQ96FX8 193 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 PRRG3Q9BZD7 231 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 MRPL37Q9BZE1 423 aaKnown RBP12.35□□□□□ -0.43
COL3A1-203ENST00000450867 PNRC2Q9NPJ4 139 aaKnown RBP12.35□□□□□ -0.43
COL3A1-203ENST00000450867 HINT3Q9NQE9 182 aaKnown RBP12.35□□□□□ -0.43
COL3A1-203ENST00000450867 TUBG2Q9NRH3 451 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 TBCCD1Q9NVR7 557 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 POLR1DQ9Y2S0 133 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 PMF1-BGLAPU3KQ54 211 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 MTORP42345 2549 aa12.35□□□□□ -0.43
COL3A1-203ENST00000450867 PRR23D1E9PI22 279 aaPredicted RBP12.34□□□□□ -0.43
COL3A1-203ENST00000450867 IGHV4-39P01824 125 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 HLA-DQA2P01906 255 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 PRR23D2P0DMB1 279 aaPredicted RBP12.34□□□□□ -0.43
COL3A1-203ENST00000450867 ENTPD1P49961 510 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 ATP5J2P56134 94 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 ECH1Q13011 328 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 RSPO1Q2MKA7 263 aaPredicted RBP12.34□□□□□ -0.43
COL3A1-203ENST00000450867 SLC35D3Q5M8T2 416 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 Q5PR19 223 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 ELFN2Q5R3F8 820 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 VHLLQ6RSH7 139 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 LYPD4Q6UWN0 246 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 CFAP77Q6ZQR2 320 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 RFPL4BQ6ZWI9 263 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 TGIF2LYQ8IUE0 185 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 ZNF511Q8NB15 262 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 OR51L1Q8NGJ5 315 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 C4orf45Q96LM5 186 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 MED20Q9H944 212 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 ELOVL3Q9HB03 270 aa12.34□□□□□ -0.43
COL3A1-203ENST00000450867 BARX1Q9HBU1 254 aaPredicted RBP12.34□□□□□ -0.43
COL3A1-203ENST00000450867 DDX28Q9NUL7 540 aaKnown RBP12.34□□□□□ -0.43
COL3A1-203ENST00000450867 EIF3KQ9UBQ5 218 aaKnown RBP12.34□□□□□ -0.43
COL3A1-203ENST00000450867 GDF2Q9UK05 429 aaPredicted RBP12.34□□□□□ -0.43
COL3A1-203ENST00000450867 TVP23AA6NH52 213 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 EI24O14681 340 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 FAM157BP0CG42 384 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 PSKH1P11801 424 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 ZNF823P16415 610 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 OTX1P32242 354 aaPredicted RBP12.33□□□□□ -0.44
COL3A1-203ENST00000450867 RGS6P49758 472 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 ALDH3A2P51648 485 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 SNAPC1Q16533 368 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 RGS7BPQ6MZT1 257 aaPredicted RBP12.33□□□□□ -0.44
COL3A1-203ENST00000450867 PLBD1Q6P4A8 553 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 CORO6Q6QEF8 472 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 ARL9Q6T311 187 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 COLCA1Q6ZS62 124 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 CPOQ8IVL8 374 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 LINC00346Q8IVM7 164 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 TIGD4Q8IY51 512 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 OR10S1Q8NGN2 331 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 OR2AJ1Q8NGZ0 328 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 ST7LQ8TDW4 575 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 MARS2Q96GW9 593 aaKnown RBP12.33□□□□□ -0.44
COL3A1-203ENST00000450867 PLEKHA8Q96JA3 519 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 MAP6Q96JE9 813 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 WDR76Q9H967 626 aa12.33□□□□□ -0.44
COL3A1-203ENST00000450867 NDUFS7O75251 213 aa12.32□□□□□ -0.44
COL3A1-203ENST00000450867 IGHV3-13P01766 116 aa12.32□□□□□ -0.44
COL3A1-203ENST00000450867 CCNOP22674 350 aa12.32□□□□□ -0.44
COL3A1-203ENST00000450867 MBNL2Q5VZF2 373 aaKnown RBP12.32□□□□□ -0.44
COL3A1-203ENST00000450867 RHOUQ7L0Q8 258 aa12.32□□□□□ -0.44
COL3A1-203ENST00000450867 CXXC5Q7LFL8 322 aaKnown RBP12.32□□□□□ -0.44
COL3A1-203ENST00000450867 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.32□□□□□ -0.44
COL3A1-203ENST00000450867 WFDC11Q8NEX6 87 aa12.32□□□□□ -0.44
COL3A1-203ENST00000450867 OR1J1Q8NGS3 322 aa12.32□□□□□ -0.44
COL3A1-203ENST00000450867 OR6K6Q8NGW6 343 aa12.32□□□□□ -0.44
COL3A1-203ENST00000450867 STMN2Q93045 179 aa12.32□□□□□ -0.44
COL3A1-203ENST00000450867 COG8Q96MW5 612 aa12.32□□□□□ -0.44
COL3A1-203ENST00000450867 INTS14Q96SY0 518 aa12.32□□□□□ -0.44
COL3A1-203ENST00000450867 ATF6BQ99941 703 aa12.32□□□□□ -0.44
COL3A1-203ENST00000450867 C9orf16Q9BUW7 83 aa12.32□□□□□ -0.44
COL3A1-203ENST00000450867 CDADC1Q9BWV3 514 aa12.32□□□□□ -0.44
COL3A1-203ENST00000450867 TVP23BQ9NYZ1 205 aa12.32□□□□□ -0.44
COL3A1-203ENST00000450867 YLPM1P49750 1951 aaKnown RBP12.32□□□□□ -0.44
COL3A1-203ENST00000450867 TLN2Q9Y4G6 2542 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms