RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 RFKQ969G6 155 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 MCHR2Q969V1 340 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 BOD1Q96IK1 185 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 SYT4Q9H2B2 425 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 CRLF2Q9HC73 371 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 SRA1Q9HD15 236 aaKnown RBP14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 RPRD1BQ9NQG5 326 aaKnown RBP14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 CR1P17927 2039 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 ZANQ9Y493 2812 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 OR6C68A6NDL8 312 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 SLC16A7O60669 478 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 FAM20BO75063 409 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 PCSK6P29122 969 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 BLVRAP53004 296 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 EFNB1P98172 346 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 TEKQ02763 1124 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 RAB39AQ14964 217 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 MAD2L1BPQ15013 274 aaPredicted RBP14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 OCLNQ16625 522 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 HIST3H3Q16695 136 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 SLC35D3Q5M8T2 416 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 SLC25A30Q5SVS4 291 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 ENTHD1Q8IYW4 607 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 RHOXF1Q8NHV9 184 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 TMIGD2Q96BF3 282 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 DDOQ99489 341 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 REG4Q9BYZ8 158 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 RERGLQ9H628 205 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 SEC61A2Q9H9S3 476 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 OBP2BQ9NPH6 170 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 HINT3Q9NQE9 182 aaKnown RBP14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 TLN2Q9Y4G6 2542 aa14.79□□□□□ -0.04
PRPF40A-204ENST00000450303 FN1P02751 2386 aaKnown RBP14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 NSD1Q96L73 2696 aaPredicted RBP14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 FAM183AA6NL82 134 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 RPL36A-HNRNPH2H7BZ11 118 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 M0R129 80 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 PRODHO43272 600 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 DHHO43323 396 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 APOBEC3AP31941 199 aaPredicted RBP14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 RPS7P62081 194 aaKnown RBP14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 MVKQ03426 396 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 ETFDHQ16134 617 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 KLHL12Q53G59 568 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 LCN1P1Q5VSP4 162 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 ZNF544Q6NX49 715 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 SLC25A47Q6Q0C1 308 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 PROKR2Q8NFJ6 384 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 PTP4A1Q93096 173 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 UBE2FQ969M7 185 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 KCNS3Q9BQ31 491 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 CCDC90BQ9GZT6 254 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 NUAK2Q9H093 628 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 RACGAP1Q9H0H5 632 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 OR51V1Q9H2C8 321 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 B9D1Q9UPM9 204 aa14.78□□□□□ -0.04
PRPF40A-204ENST00000450303 ARPC4-TTLL3A0A0A6YYG9 625 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 ZNF503-AS2A6NEH8 195 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 CELA3BP08861 270 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 CECR9P0C854 216 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 DCKP27707 260 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 ZNF133P52736 654 aaPredicted RBP14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 NUDT6P53370 316 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 TMBIM6P55061 237 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 GLO1Q04760 184 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 TMED1Q13445 227 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 RAB35Q15286 201 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 C10orf128Q5T292 105 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 C1QTNF12Q5T7M4 302 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 ZBTB46Q86UZ6 589 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 MYPOPQ86VE0 399 aaPredicted RBP14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 SPARTQ8N0X7 666 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 OR9Q1Q8NGQ5 310 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 OR13F1Q8NGS4 319 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 NSMAFQ92636 917 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 ISOC1Q96CN7 298 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 FBXO17Q96EF6 278 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 NMNAT2Q9BZQ4 307 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 MED20Q9H944 212 aa14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 BARX1Q9HBU1 254 aaPredicted RBP14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.77□□□□□ -0.05
PRPF40A-204ENST00000450303 ARFGEF3Q5TH69 2177 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 SLC22A31A6NKX4 558 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 INAFM1C9JVW0 142 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 PTGES3LE9PB15 166 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 RGS10O43665 173 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 GLCEO94923 617 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 CRYAAP02489 173 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 SPI1P17947 270 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 GABRB1P18505 474 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 CALCRP30988 508 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 FMO3P31513 532 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 CAPZA2P47755 286 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 NAAAQ02083 359 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 FMODQ06828 376 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 KRTAP21-3Q3LHN1 58 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 AADACL4Q5VUY2 407 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 GPR107Q5VW38 600 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 LRFN4Q6PJG9 635 aa14.76□□□□□ -0.05
PRPF40A-204ENST00000450303 VHLLQ6RSH7 139 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms