RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 OR52D1Q9H346 318 aa13□□□□□ -0.33
CHD3-205ENST00000449744 TUBG2Q9NRH3 451 aa13□□□□□ -0.33
CHD3-205ENST00000449744 ZDHHC8Q9ULC8 765 aa13□□□□□ -0.33
CHD3-205ENST00000449744 GRIP1Q9Y3R0 1128 aa13□□□□□ -0.33
CHD3-205ENST00000449744 ZSCAN5BA6NJL1 495 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 FAM157AC9JC47 383 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 WNT9BO14905 357 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 MSMBP08118 114 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 GAAP10253 952 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 ANPEPP15144 967 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 FPR3P25089 353 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 NOS3P29474 1203 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 SLC3A1Q07837 685 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 MTX3Q5HYI7 312 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 TMEM255AQ5JRV8 349 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 C1orf94Q6P1W5 598 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 LEG1Q6P5S2 330 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 RINLQ6ZS11 566 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.99□□□□□ -0.33
CHD3-205ENST00000449744 PHC2Q8IXK0 858 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 OR51F2Q8NH61 342 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 OR1F12Q8NHA8 337 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 GNPDA2Q8TDQ7 276 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 CCL17Q92583 94 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 TMEM186Q96B77 213 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 RAB39BQ96DA2 213 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 IFT27Q9BW83 186 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 IL1RAPQ9NPH3 570 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 HIF1ANQ9NWT6 349 aa12.99□□□□□ -0.33
CHD3-205ENST00000449744 ARPC3O15145 178 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 ADH4P08319 380 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 LMO4P61968 165 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 TNFAIP6P98066 277 aaPredicted RBP12.98□□□□□ -0.33
CHD3-205ENST00000449744 PSG7Q13046 419 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 KCNMB1Q16558 191 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 CCDC92Q53HC0 331 aaPredicted RBP12.98□□□□□ -0.33
CHD3-205ENST00000449744 CYP2R1Q6VVX0 501 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 PEG10Q86TG7 708 aaKnown RBP12.98□□□□□ -0.33
CHD3-205ENST00000449744 GJC3Q8NFK1 279 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 OR4K13Q8NH42 304 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 SAMD8Q96LT4 415 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 TSSK2Q96PF2 358 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 NMNAT3Q96T66 252 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 ZNF665Q9H7R5 613 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 MSL2Q9HCI7 577 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 SRA1Q9HD15 236 aaKnown RBP12.98□□□□□ -0.33
CHD3-205ENST00000449744 B9D1Q9UPM9 204 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 STARD10Q9Y365 291 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 WIPI2Q9Y4P8 454 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 CACNG2Q9Y698 323 aa12.98□□□□□ -0.33
CHD3-205ENST00000449744 FBN1P35555 2871 aaKnown RBP12.97□□□□□ -0.33
CHD3-205ENST00000449744 OR6C6A6NF89 314 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 B2RBV5 119 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 RER1O15258 196 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 KRT36O76013 467 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 GPANK1O95872 356 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 TNFSF4P23510 183 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 GSSP48637 474 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 RGS6P49758 472 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 TSPAN31Q12999 210 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 LIPNQ5VXI9 398 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 ACSM5Q6NUN0 579 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 OR5L1Q8NGL2 311 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 SLC7A6Q92536 515 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 PTP4A1Q93096 173 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 CMBLQ96DG6 245 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 NSL1Q96IY1 281 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 DCLRE1CQ96SD1 692 aaKnown RBP12.97□□□□□ -0.33
CHD3-205ENST00000449744 CCT8L2Q96SF2 557 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 ACTR3BQ9P1U1 418 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 ATPIF1Q9UII2 106 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 KLHL21Q9UJP4 597 aa12.97□□□□□ -0.33
CHD3-205ENST00000449744 PURGQ9UJV8 347 aaKnown RBP12.97□□□□□ -0.33
CHD3-205ENST00000449744 TRAV20A0A0B4J274 112 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 ISPDA4D126 451 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 TNFRSF11BO00300 401 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 DCTN6O00399 190 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 IDH3BO43837 385 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 UBOX5O94941 541 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 HLA-DQA2P01906 255 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 CD55P08174 381 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 HIST1H1CP16403 213 aaKnown RBP12.96□□□□□ -0.33
CHD3-205ENST00000449744 MEP1BQ16820 701 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 SLC36A3Q495N2 470 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 RPL13AP3Q6NVV1 102 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 FAHD2BQ6P2I3 314 aaPredicted RBP12.96□□□□□ -0.33
CHD3-205ENST00000449744 PGBD2Q6P3X8 592 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 SHQ1Q6PI26 577 aaKnown RBP12.96□□□□□ -0.33
CHD3-205ENST00000449744 OR6V1Q8N148 313 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 ARHGAP24Q8N264 748 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 LINC00471Q8N535 108 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 FITM2Q8N6M3 262 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 OR2Z1Q8NG97 314 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 OR52L1Q8NGH7 329 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 FAHD2AQ96GK7 314 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 GAL3ST1Q99999 423 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 CDADC1Q9BWV3 514 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 HDHD2Q9H0R4 259 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 POFUT1Q9H488 388 aa12.96□□□□□ -0.33
CHD3-205ENST00000449744 RPRD1BQ9NQG5 326 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms