RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 ASB5Q8WWX0 329 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 RORBQ92753 470 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 OR8B4Q96RC9 309 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 MROQ9BYG7 248 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 NOX3Q9HBY0 568 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 JKAMPQ9P055 326 aa12.79□□□□□ -0.36
TNF-208ENST00000449264 MRM2Q9UI43 246 aaKnown RBP12.79□□□□□ -0.36
TNF-208ENST00000449264 LSM2Q9Y333 95 aaKnown RBP12.79□□□□□ -0.36
TNF-208ENST00000449264 TRIM64CA6NLI5 447 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 ZNF878C9JN71 531 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 PYCARD-AS1I3L0S3 204 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 INMTO95050 263 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 RPP14O95059 124 aaKnown RBP12.78□□□□□ -0.36
TNF-208ENST00000449264 UBL3O95164 117 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 MT-ND5P03915 603 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 MMP7P09237 267 aaPredicted RBP12.78□□□□□ -0.36
TNF-208ENST00000449264 H2BFMP0C1H6 154 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 PSG4Q00888 419 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 SPHARQ15513 63 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 TAF13Q15543 124 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 SLC25A35Q3KQZ1 300 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 CCDC92Q53HC0 331 aaPredicted RBP12.78□□□□□ -0.36
TNF-208ENST00000449264 ZNF367Q7RTV3 350 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 KLBQ86Z14 1044 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 CA5BP1Q8WTZ4 195 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 RNF133Q8WVZ7 376 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 MYCBPQ99417 103 aaPredicted RBP12.78□□□□□ -0.36
TNF-208ENST00000449264 OR2H1Q9GZK4 316 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 ELOVL3Q9HB03 270 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 PNRC2Q9NPJ4 139 aaKnown RBP12.78□□□□□ -0.36
TNF-208ENST00000449264 LRP12Q9Y561 859 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 TIMM10BQ9Y5J6 103 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 FLNCQ14315 2725 aa12.78□□□□□ -0.36
TNF-208ENST00000449264 NKX2-6A6NCS4 301 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 METTL15A6NJ78 407 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 PSMB1P20618 241 aaKnown RBP12.77□□□□□ -0.36
TNF-208ENST00000449264 PSMB10P40306 273 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 OPRL1P41146 370 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 ASCL1P50553 236 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 RAB35Q15286 201 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 GSG1Q2KHT4 349 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 PABPC1L2AQ5JQF8 200 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 ELFN2Q5R3F8 820 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 ALKBH2Q6NS38 261 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 TMEM53Q6P2H8 277 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 VASH1Q7L8A9 365 aaPredicted RBP12.77□□□□□ -0.36
TNF-208ENST00000449264 SYT9Q86SS6 491 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 MDP1Q86V88 176 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.77□□□□□ -0.36
TNF-208ENST00000449264 ZNF679Q8IYX0 411 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 SYS1Q8N2H4 156 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 FCGR1BQ92637 280 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 S100PBPQ96BU1 408 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 ATF6BQ99941 703 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 SLC17A5Q9NRA2 495 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 ELOVL5Q9NYP7 299 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 FBXL3Q9UKT7 428 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 GRIP1Q9Y3R0 1128 aa12.77□□□□□ -0.36
TNF-208ENST00000449264 PNMA8CA0A1B0GUJ8 204 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 ZG16O60844 167 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 ABHD16AO95870 558 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 HSD11B1P28845 292 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 CCKARP32238 428 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 HTR5AP47898 357 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 RIDAP52758 137 aaKnown RBP12.77□□□□□ -0.37
TNF-208ENST00000449264 RAB1AP62820 205 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 HIST1H3AP68431 136 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 ROM1Q03395 351 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 CDSNQ15517 529 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 TIGD6Q17RP2 521 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 ZNF684Q5T5D7 378 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 HIST2H3PS2Q5TEC6 136 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 UBE2UQ5VVX9 321 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 HIST2H3AQ71DI3 136 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 C17orf78Q8N4C9 275 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 ZFP41Q8N8Y5 198 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 SLC7A6Q92536 515 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 MUL1Q969V5 352 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 PELI1Q96FA3 418 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 ACTR6Q9GZN1 396 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 HDHD2Q9H0R4 259 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 WNT5BQ9H1J7 359 aa12.77□□□□□ -0.37
TNF-208ENST00000449264 OR5H1A6NKK0 313 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 SULT1C4O75897 302 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 LALBAP00709 142 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 TFAP2AP05549 437 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 TACSTD2P09758 323 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 UGT2B10P36537 528 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 ARR3P36575 388 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 GTF2A1P52655 376 aaPredicted RBP12.76□□□□□ -0.37
TNF-208ENST00000449264 NR1H2P55055 460 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 GALK2Q01415 458 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 LIPNQ5VXI9 398 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 DPPA2Q7Z7J5 298 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 ZNF485Q8NCK3 441 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 WACQ9BTA9 647 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 HDHD5Q9BXW7 423 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 TRIM36Q9NQ86 728 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 GTF2A1LQ9UNN4 478 aa12.76□□□□□ -0.37
TNF-208ENST00000449264 ARPC4-TTLL3A0A0A6YYG9 625 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms