RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 OR10X1Q8NGY0 326 aa9.27□□□□□ -0.92
SCN10A-201ENST00000449082 KISS1RQ969F8 398 aaPredicted RBP9.27□□□□□ -0.92
SCN10A-201ENST00000449082 ATF6BQ99941 703 aa9.27□□□□□ -0.92
SCN10A-201ENST00000449082 SIAEQ9HAT2 523 aa9.27□□□□□ -0.92
SCN10A-201ENST00000449082 F6UZH7 168 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 CTGFP29279 349 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 ARL16Q0P5N6 197 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 OR1C1Q15619 314 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 LAIR1Q6GTX8 287 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 ANKRD16Q6P6B7 361 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 NAA40Q86UY6 237 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 FAM185AQ8N0U4 392 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 SLCO4A1Q96BD0 722 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 GABARAPL1Q9H0R8 117 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 A0A0B4J2A0 478 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 OR2A25A4D2G3 310 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 ABCD4O14678 606 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 ELK1P19419 428 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 GNB2P62879 340 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 DOC2BQ14184 412 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 ZNF266Q14584 549 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 KHDC1LQ5JSQ8 128 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 PKMYT1Q99640 499 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 HINT3Q9NQE9 182 aaKnown RBP9.27□□□□□ -0.93
SCN10A-201ENST00000449082 SHPKQ9UHJ6 478 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 PAPPAQ13219 1627 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 CLN5O75503 358 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 ZIC2O95409 532 aaPredicted RBP9.27□□□□□ -0.93
SCN10A-201ENST00000449082 FAM157BP0CG42 384 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 SSTR2P30874 369 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 ARRB2P32121 409 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 FXNQ16595 210 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 TMEM99Q8N816 258 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 PLPP5Q8NEB5 264 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 OR2AE1Q8NHA4 323 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 SLC25A37Q9NYZ2 338 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 CTSFQ9UBX1 484 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 CLEC3BP05452 202 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 NPY4RP50391 375 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 EMP3P54852 163 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 MC2RQ01718 297 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 POU4F3Q15319 338 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 IAH1Q2TAA2 248 aaPredicted RBP9.27□□□□□ -0.93
SCN10A-201ENST00000449082 DHRS13Q6UX07 377 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 DEFB124Q8NES8 71 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 OR6K3Q8NGY3 331 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 GAB3Q8WWW8 586 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 TCEAL2Q9H3H9 227 aaPredicted RBP9.27□□□□□ -0.93
SCN10A-201ENST00000449082 QPCTLQ9NXS2 382 aa9.27□□□□□ -0.93
SCN10A-201ENST00000449082 TRGV5A0A0B4J1U4 118 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 ZC3H12DA2A288 527 aaKnown RBP9.26□□□□□ -0.93
SCN10A-201ENST00000449082 SNAPINO95295 136 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 ETHE1O95571 254 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 TCRBP04435 133 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 APEX1P27695 318 aaKnown RBP9.26□□□□□ -0.93
SCN10A-201ENST00000449082 ETV1P50549 477 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 RELAQ04206 551 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 FOXF1Q12946 379 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 LIN37Q96GY3 246 aaPredicted RBP9.26□□□□□ -0.93
SCN10A-201ENST00000449082 BIN3Q9NQY0 253 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 MED29Q9NX70 200 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 CISD3P0C7P0 127 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 RPA2P15927 270 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 PTBP1P26599 531 aaKnown RBP eCLIP9.26□□□□□ -0.93
SCN10A-201ENST00000449082 B4GALNT1Q00973 533 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 EBPQ15125 230 aaKnown RBP9.26□□□□□ -0.93
SCN10A-201ENST00000449082 ACSM5Q6NUN0 579 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 NRARPQ7Z6K4 114 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 DEFB108BQ8NET1 73 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 OR11G2Q8NGC1 345 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 ROBO4Q8WZ75 1007 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 ERVMER34-1Q9H9K5 563 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 GPR84Q9NQS5 396 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 FBXL2Q9UKC9 423 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 KIAA0100Q14667 2235 aaKnown RBP9.26□□□□□ -0.93
SCN10A-201ENST00000449082 RAB27BO00194 218 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 FADS1O60427 444 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 ADH4P08319 380 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 HOXC4P09017 264 aaPredicted RBP9.26□□□□□ -0.93
SCN10A-201ENST00000449082 HCCSP53701 268 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 RPL11P62913 178 aaKnown RBP9.26□□□□□ -0.93
SCN10A-201ENST00000449082 NLRC3Q7RTR2 1065 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 ZDHHC23Q8IYP9 409 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 BATF2Q8N1L9 274 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 RPP25Q9BUL9 199 aaKnown RBP9.26□□□□□ -0.93
SCN10A-201ENST00000449082 UGT2A1Q9Y4X1 527 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 CDK5RAP2Q96SN8 1893 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 ANKRD61A6NGH8 418 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 PRKNO60260 465 aaPredicted RBP9.26□□□□□ -0.93
SCN10A-201ENST00000449082 CLEC2LP0C7M8 214 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 SRP9P49458 86 aaKnown RBP9.26□□□□□ -0.93
SCN10A-201ENST00000449082 CCR9P51686 369 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.26□□□□□ -0.93
SCN10A-201ENST00000449082 ZNF766Q5HY98 468 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 GCNT2Q8N0V5 402 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 CMTM2Q8TAZ6 248 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 GABARAPL3Q9BY60 117 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 SCPEP1Q9HB40 452 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 R4GMQ9 66 aa9.26□□□□□ -0.93
SCN10A-201ENST00000449082 TRABD2BA6NFA1 517 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms