RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 SLC37A3Q8NCC5 494 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 OR9Q1Q8NGQ5 310 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 OR1J1Q8NGS3 322 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 OR2T4Q8NH00 348 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 OR4Q3Q8NH05 313 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 POM121L2Q96KW2 1035 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 DUSP13Q9UII6 198 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 KLHL21Q9UJP4 597 aa12.52□□□□□ -0.41
USP39-206ENST00000448971 LOC100509620A0A075B734 347 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 ABHD16AO95870 558 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 ANXA8P13928 327 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 PRKACGP22612 351 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 PYCR1P32322 319 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 UCP2P55851 309 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 SELENOVP59797 346 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 CCNIQ14094 377 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 CARTPTQ16568 116 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 NKPD1Q17RQ9 610 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 MSMPQ1L6U9 139 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 SHQ1Q6PI26 577 aaKnown RBP12.51□□□□□ -0.41
USP39-206ENST00000448971 CD300LDQ6UXZ3 194 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 RFPL4BQ6ZWI9 263 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 ASRGL1Q7L266 308 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 VASH1Q7L8A9 365 aaPredicted RBP12.51□□□□□ -0.41
USP39-206ENST00000448971 ZBTB46Q86UZ6 589 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 ZNF101Q8IZC7 436 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 ZNF525Q8N782 197 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 NPEPL1Q8NDH3 523 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 SLC26A10Q8NG04 563 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 ABHD4Q8TB40 342 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 RAB1BQ9H0U4 201 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 TPK1Q9H3S4 243 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 HEATR1Q9H583 2144 aaKnown RBP12.51□□□□□ -0.41
USP39-206ENST00000448971 AP4S1Q9Y587 144 aa12.51□□□□□ -0.41
USP39-206ENST00000448971 A0A096LNT2 108 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 A8MV72 311 aaPredicted RBP12.5□□□□□ -0.41
USP39-206ENST00000448971 SYNGR3O43761 229 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 LY6HO94772 140 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 ADRA2AP08913 450 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 CSF3P09919 207 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 COX5BP10606 129 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 FCGR1AP12314 374 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 ZNF23P17027 643 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 FASP25445 335 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 GCH1P30793 250 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 GRK5P34947 590 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 WNT5AP41221 380 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 ALDH3B1P43353 468 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 KLF3P57682 345 aaPredicted RBP12.5□□□□□ -0.41
USP39-206ENST00000448971 TEKQ02763 1124 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 MAD2L1BPQ15013 274 aaPredicted RBP12.5□□□□□ -0.41
USP39-206ENST00000448971 ATP6AP1Q15904 470 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 KCNMB1Q16558 191 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 CHRFAM7AQ494W8 412 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 SPATA46Q5T0L3 261 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 SLC27A4Q6P1M0 643 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 ARL9Q6T311 187 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 LINC00346Q8IVM7 164 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 OR2AJ1Q8NGZ0 328 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 SYNPRQ8TBG9 265 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 SNX33Q8WV41 574 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 RNF166Q96A37 237 aaPredicted RBP12.5□□□□□ -0.41
USP39-206ENST00000448971 OTULINQ96BN8 352 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 CDADC1Q9BWV3 514 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 HDHD2Q9H0R4 259 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 MYEF2Q9P2K5 600 aaKnown RBP12.5□□□□□ -0.41
USP39-206ENST00000448971 MALRD1Q5VYJ5 2156 aa12.5□□□□□ -0.41
USP39-206ENST00000448971 ANK2Q01484 3957 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 TMEM129A0AVI4 362 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 RER1O15258 196 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 PHF1O43189 567 aaPredicted RBP12.49□□□□□ -0.41
USP39-206ENST00000448971 GYPBP06028 91 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 OSMP13725 252 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 ZNF823P16415 610 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 EVX1P49640 407 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 DSCR9P59020 149 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 ALKBH6Q3KRA9 238 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 CORO6Q6QEF8 472 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 LRP11Q86VZ4 500 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 GJC3Q8NFK1 279 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 OR51L1Q8NGJ5 315 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 OR6K6Q8NGW6 343 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 OR5K1Q8NHB7 308 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 DNAJC9Q8WXX5 260 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 FAM168AQ92567 244 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 UTP4Q969X6 686 aaKnown RBP12.49□□□□□ -0.41
USP39-206ENST00000448971 NRBF2Q96F24 287 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 C4orf45Q96LM5 186 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 DOK1Q99704 481 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 RHNO1Q9BSD3 238 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 TEX12Q9BXU0 123 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 ELOVL3Q9HB03 270 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 NTN4Q9HB63 628 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 PAPOLBQ9NRJ5 636 aaKnown RBP12.49□□□□□ -0.41
USP39-206ENST00000448971 CMC2Q9NRP2 79 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 REV1Q9UBZ9 1251 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 GPR160Q9UJ42 338 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 LHFPL6Q9Y693 200 aa12.49□□□□□ -0.41
USP39-206ENST00000448971 IGHV4-30-2A0A087WSY4 118 aa12.48□□□□□ -0.41
USP39-206ENST00000448971 OR6C6A6NF89 314 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms