RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 OTOGLQ3ZCN5 2332 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 MYO15AQ9UKN7 3530 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 NCKAP5O14513 1909 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 TMEM269A0A1B0GVZ9 245 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 PINLYPA6NC86 204 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 ARGFXA6NJG6 315 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 ANXA2P2A6NMY6 339 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 IFITM5A6NNB3 132 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 NME2P1O60361 137 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 SLC43A1O75387 559 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 F10P00742 488 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 ANXA2P07355 339 aaKnown RBP9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 CALCBP10092 127 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 SLC2A2P11168 524 aaPredicted RBP9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 ELK1P19419 428 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 MSR1P21757 451 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 NME2P22392 152 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 AZGP1P25311 298 aaKnown RBP9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 NR4A2P43354 598 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 SOX2P48431 317 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 CLDN20P56880 219 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 PITPNAQ00169 270 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 TAF13Q15543 124 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 HYAL4Q2M3T9 481 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 SLC25A35Q3KQZ1 300 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 CEP78Q5JTW2 689 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 TRIQKQ629K1 86 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 LRFN4Q6PJG9 635 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 STAC2Q6ZMT1 411 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 FOXL2NBQ6ZUU3 175 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 SPATC1Q76KD6 591 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 REC114Q7Z4M0 266 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 Q8N402 240 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 TMEM178AQ8NBL3 297 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 MDS2Q8NDY4 140 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 C19orf18Q8NEA5 215 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 OR10D3Q8NH80 312 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 HAS2Q92819 552 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 ADGRG7Q96K78 797 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 SRXN1Q9BYN0 137 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 TTTY12Q9BZ98 90 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 NELFAQ9H3P2 528 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 PPP1R3EQ9H7J1 279 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 C14orf119Q9NWQ9 140 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 CKLFQ9UBR5 152 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 GDF2Q9UK05 429 aaPredicted RBP9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 OR52A1Q9UKL2 312 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 FOXJ3Q9UPW0 622 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 DHDHQ9UQ10 334 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 PTPRBP23467 1997 aa9.37□□□□□ -0.91
VIPAS39-203ENST00000448935 IGHV3-15A0A0B4J1V0 119 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 ACOT7O00154 380 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 MAGEB3O15480 346 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 DHHO43323 396 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 CXCL13O43927 109 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 SRSF10O75494 262 aaKnown RBP9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 PNPP00491 289 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 ATF1P18846 271 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 HSD11B1P28845 292 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 PITPNBP48739 271 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 INPP1P49441 399 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 NOVA1P51513 510 aaKnown RBP9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 BCAP31P51572 246 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 GRB2P62993 217 aaKnown RBP9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 BCL2A1Q16548 175 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 BCL2L15Q5TBC7 163 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 HACD4Q5VWC8 232 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 ABLIM2Q6H8Q1 611 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 PYHIN1Q6K0P9 492 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 C20orf196Q8IYI0 205 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 UBQLNLQ8IYU4 475 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 TMEM123Q8N131 208 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 ZNF433Q8N7K0 673 aaPredicted RBP9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 IL17RDQ8NFM7 739 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 ZNF385AQ96PM9 386 aaKnown RBP9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 KCNJ15Q99712 375 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 ULBP2Q9BZM5 246 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 SLC25A18Q9H1K4 315 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 PLA2G3Q9NZ20 509 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 EMC9Q9Y3B6 208 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 FLVCR1Q9Y5Y0 555 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 ETV7Q9Y603 341 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 LHFPL6Q9Y693 200 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 FRYLO94915 3013 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 SPEGQ15772 3267 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 ALPK2Q86TB3 2170 aa9.36□□□□□ -0.91
VIPAS39-203ENST00000448935 A0A1B0GTH9 108 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 FUOMA2VDF0 154 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 MEGF11A6BM72 1044 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 CYTIPO60759 359 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 BPNT1O95861 308 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 HLA-DQB1P01920 261 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 CSF3P09919 207 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 FSTP19883 344 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 KLK2P20151 261 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 RANBP1P43487 201 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 MEOX1P50221 254 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 ARG2P78540 354 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 MFGE8Q08431 387 aaPredicted RBP9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 ASAH1Q13510 395 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms