RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 OR1J1Q8NGS3 322 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 PTP4A1Q93096 173 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 EME1Q96AY2 570 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 C4orf45Q96LM5 186 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 PITX2Q99697 317 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 HCAR1Q9BXC0 346 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 HDHD2Q9H0R4 259 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 CXXC4Q9H2H0 198 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 ELOVL3Q9HB03 270 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 ZNF701Q9NV72 531 aaPredicted RBP12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 MRPL22Q9NWU5 206 aaKnown RBP12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 ATPIF1Q9UII2 106 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 TMEFF2Q9UIK5 374 aaPredicted RBP12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 GDF2Q9UK05 429 aaPredicted RBP12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 OR6C6A6NF89 314 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 ZAR1LA6NP61 321 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 ZNF593O00488 134 aaPredicted RBP12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 SYNGR3O43761 229 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 PAX1P15863 534 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 GGT2P36268 569 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 ALDH3A2P51648 485 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 SWI5Q1ZZU3 235 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 SLX4IPQ5VYV7 408 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 SHEQ5VZ18 495 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 SLC18B1Q6NT16 456 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 TMEM154Q6P9G4 183 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 SPNS3Q6ZMD2 512 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 ERI1Q8IV48 349 aaKnown RBP12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 CBR4Q8N4T8 237 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 OR6N2Q8NGY6 317 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 ABHD4Q8TB40 342 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 ZNRF4Q8WWF5 429 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 MRPL24Q96A35 216 aaKnown RBP12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 INTS14Q96SY0 518 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 COQ7Q99807 217 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 GABARAPL3Q9BY60 117 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 WDR76Q9H967 626 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 BARX1Q9HBU1 254 aaPredicted RBP12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 DYNLRB1Q9NP97 96 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 HINT3Q9NQE9 182 aaKnown RBP12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 USE1Q9NZ43 259 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 H2AFY2Q9P0M6 372 aaPredicted RBP12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 CYB5R1Q9UHQ9 305 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 DUSP13Q9UII6 198 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 GRIP1Q9Y3R0 1128 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 COMMD3-BMI1R4GMX3 469 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 CCDC168Q8NDH2 2452 aa12.08□□□□□ -0.48
GTF3C3-206ENST00000448539 A0A1W2PPW3 197 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 PRODHO43272 600 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 TLX2O43763 284 aaPredicted RBP12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 ALPLP05186 524 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 ERCC1P07992 297 aaPredicted RBP12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 GCH1P30793 250 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 EVX1P49640 407 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 HIST1H3AP68431 136 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 ECH1Q13011 328 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 MOGQ16653 247 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 MST1LQ2TV78 715 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 SLC35D3Q5M8T2 416 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 Q5PR19 223 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 HIST2H3PS2Q5TEC6 136 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 C12orf73Q69YU5 71 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 LYPD4Q6UWN0 246 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 CFAP77Q6ZQR2 320 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 ZBTB49Q6ZSB9 765 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 HIST2H3AQ71DI3 136 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 SHFQ7M4L6 423 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 SYNPRQ8TBG9 265 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 IPCEF1Q8WWN9 437 aaPredicted RBP12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 ZMYND19Q96E35 227 aaPredicted RBP12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 DCLRE1CQ96SD1 692 aaKnown RBP12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 ATF6BQ99941 703 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 VRK1Q99986 396 aaPredicted RBP12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 SYT3Q9BQG1 590 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 MRPL37Q9BZE1 423 aaKnown RBP12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 GPR160Q9UJ42 338 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 FZR1Q9UM11 496 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 F8P00451 2351 aa12.07□□□□□ -0.48
GTF3C3-206ENST00000448539 H7C417 338 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 PRKYO43930 277 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 EPHA2P29317 976 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 WNT5AP41221 380 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 RPS27P42677 84 aaKnown RBP12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 RGS6P49758 472 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 KLF3P57682 345 aaPredicted RBP12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 PPP1CBP62140 327 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 APOFQ13790 326 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 RCN1Q15293 331 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 TAF13Q15543 124 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 ZNF718Q3SXZ3 478 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 TEX30Q5JUR7 227 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 SPATA46Q5T0L3 261 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 LINC01590Q5TEZ4 76 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 LCN1P1Q5VSP4 162 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 PRSS57Q6UWY2 283 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 DCXRQ7Z4W1 244 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 ZNF101Q8IZC7 436 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 TCEANCQ8N8B7 351 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 BBS1Q8NFJ9 593 aa12.06□□□□□ -0.48
GTF3C3-206ENST00000448539 TMEM163Q8TC26 289 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms