RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ADIPOQQ15848 244 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 CARTPTQ16568 116 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 KRTAP24-1Q3LI83 254 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 FAM120AOSQ5T036 256 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 ZNF691Q5VV52 312 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 FAM205BPQ63HN1 556 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 LYPD4Q6UWN0 246 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 CPOQ8IVL8 374 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 ENTHD1Q8IYW4 607 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 GPR137CQ8N3F9 429 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 NUP37Q8NFH4 326 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 OR51L1Q8NGJ5 315 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 MCHR2Q969V1 340 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 PLEKHA8Q96JA3 519 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 ZNF184Q99676 751 aaPredicted RBP11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 ALG12Q9BV10 488 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 NUAK2Q9H093 628 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 ZNF442Q9H7R0 627 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 SRA1Q9HD15 236 aaKnown RBP11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 GLTPQ9NZD2 209 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 DNAJC27Q9NZQ0 273 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 VSX1Q9NZR4 365 aaPredicted RBP11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 KLHL21Q9UJP4 597 aa11.87□□□□□ -0.51
PDLIM2-213ENST00000448520 IGHV4-61A0A0C4DH41 118 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 H0YAE9 185 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 SLC16A7O60669 478 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 RENP00797 406 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 TGFAP01135 160 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 IFNGP01579 166 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 CECR9P0C854 216 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 ARR3P36575 388 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 IL5RAQ01344 420 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 ROR2Q01974 943 aaKnown RBP11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 HIST3H3Q16695 136 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 LIPNQ5VXI9 398 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 TTC23Q5W5X9 447 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 SLC25A47Q6Q0C1 308 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 VHLLQ6RSH7 139 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 UGT2A3Q6UWM9 527 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 USP51Q70EK9 711 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 ADCK1Q86TW2 530 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 OR6V1Q8N148 313 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 CNIH3Q8TBE1 160 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 TMEM163Q8TC26 289 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 APH1BQ8WW43 257 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 PTP4A1Q93096 173 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 DOK1Q99704 481 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 ULBP2Q9BZM5 246 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 NMNAT2Q9BZQ4 307 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 OR51V1Q9H2C8 321 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 CHODLQ9H9P2 273 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 GPR35Q9HC97 309 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 IMPAD1Q9NX62 359 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 PCDHGB5Q9Y5G0 923 aa11.86□□□□□ -0.51
PDLIM2-213ENST00000448520 SVEP1Q4LDE5 3571 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 A0A096LPE4 126 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 IGLV1-36A0A0B4J1U3 117 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 A0A1W2PPZ6 126 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 PRR23D1E9PI22 279 aaPredicted RBP11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 MPZL1O95297 269 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 PRR23D2P0DMB1 279 aaPredicted RBP11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 GABRB1P18505 474 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 NPR2P20594 1047 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 GIFP27352 417 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 CDAP32320 146 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 CENPAP49450 140 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 CDC42P60953 191 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 ARF1P84077 181 aaKnown RBP11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 HGFACQ04756 655 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 MAD2L1BPQ15013 274 aaPredicted RBP11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 CEACAM16Q2WEN9 425 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 HDDC2Q7Z4H3 204 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 HPS1Q92902 700 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 C19orf24Q9BVV8 132 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 TEX12Q9BXU0 123 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 BPESC1Q9GZL8 116 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 NELFAQ9H3P2 528 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 CRLF2Q9HC73 371 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 B9D1Q9UPM9 204 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 COA3Q9Y2R0 106 aaPredicted RBP11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 UGT2A1Q9Y4X1 527 aa11.85□□□□□ -0.51
PDLIM2-213ENST00000448520 A0A1W2PPL8 197 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 CCDC182A6NF36 153 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 DHHO43323 396 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 WBP4O75554 376 aaKnown RBP11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 SCG5P05408 212 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 TACSTD2P09758 323 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 SPI1P17947 270 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 SLC2A5P22732 501 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 CALCRP30988 508 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 FMO3P31513 532 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 HSPA13P48723 471 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 CHN2P52757 468 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 ISL1P61371 349 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 TUBA1BP68363 451 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 TUBA4AP68366 448 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 SMN1Q16637 294 aaKnown RBP11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 KLHL12Q53G59 568 aa11.84□□□□□ -0.51
PDLIM2-213ENST00000448520 LAIR2Q6ISS4 152 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms