RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 ZNF283Q8N7M2 679 aa23.84■■□□□ 1.41
CBX4-202ENST00000448310 SLC7A13Q8TCU3 470 aa23.84■■□□□ 1.41
CBX4-202ENST00000448310 FAM162AQ96A26 154 aa23.84■■□□□ 1.41
CBX4-202ENST00000448310 SAMD8Q96LT4 415 aa23.84■■□□□ 1.41
CBX4-202ENST00000448310 SYT4Q9H2B2 425 aa23.84■■□□□ 1.41
CBX4-202ENST00000448310 ASH2LQ9UBL3 628 aa23.84■■□□□ 1.41
CBX4-202ENST00000448310 IL20RAQ9UHF4 553 aa23.84■■□□□ 1.41
CBX4-202ENST00000448310 COA3Q9Y2R0 106 aaPredicted RBP23.84■■□□□ 1.41
CBX4-202ENST00000448310 ENPP4Q9Y6X5 453 aa23.84■■□□□ 1.41
CBX4-202ENST00000448310 LIMS1P48059 325 aa23.83■■□□□ 1.41
CBX4-202ENST00000448310 OR5AS1Q8N127 324 aa23.83■■□□□ 1.41
CBX4-202ENST00000448310 DEFB108BQ8NET1 73 aa23.83■■□□□ 1.41
CBX4-202ENST00000448310 TMEM5Q9Y2B1 443 aa23.83■■□□□ 1.41
CBX4-202ENST00000448310 PPIAL4AQ9Y536 164 aa23.83■■□□□ 1.41
CBX4-202ENST00000448310 SOCS2O14508 198 aa23.82■■□□□ 1.4
CBX4-202ENST00000448310 AHCYL1O43865 530 aa23.82■■□□□ 1.4
CBX4-202ENST00000448310 NDUFB2O95178 105 aa23.82■■□□□ 1.4
CBX4-202ENST00000448310 DBHP09172 617 aa23.82■■□□□ 1.4
CBX4-202ENST00000448310 TNFRSF1AP19438 455 aa23.82■■□□□ 1.4
CBX4-202ENST00000448310 ZMYND11Q15326 602 aa23.82■■□□□ 1.4
CBX4-202ENST00000448310 CCDC92Q53HC0 331 aaPredicted RBP23.82■■□□□ 1.4
CBX4-202ENST00000448310 C8orf82Q6P1X6 216 aaPredicted RBP23.82■■□□□ 1.4
CBX4-202ENST00000448310 CYP4Z1Q86W10 505 aa23.82■■□□□ 1.4
CBX4-202ENST00000448310 KLHL36Q8N4N3 616 aa23.82■■□□□ 1.4
CBX4-202ENST00000448310 SPICQ8N5J4 248 aa23.82■■□□□ 1.4
CBX4-202ENST00000448310 DVL3Q92997 716 aaPredicted RBP23.82■■□□□ 1.4
CBX4-202ENST00000448310 HAVCR1Q96D42 359 aa23.82■■□□□ 1.4
CBX4-202ENST00000448310 SIGLEC11Q96RL6 698 aa23.82■■□□□ 1.4
CBX4-202ENST00000448310 NDEL1Q9GZM8 345 aa23.82■■□□□ 1.4
CBX4-202ENST00000448310 ANKRD19PQ9H560 264 aa23.82■■□□□ 1.4
CBX4-202ENST00000448310 PATZ1Q9HBE1 687 aaKnown RBP23.82■■□□□ 1.4
CBX4-202ENST00000448310 SIGLEC7Q9Y286 467 aa23.82■■□□□ 1.4
CBX4-202ENST00000448310 PPIAL4EA0A075B759 164 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 PPIAL4CA0A0B4J2A2 164 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 OR6C6A6NF89 314 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 PPIAL4DF5H284 164 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 TRAPPC2LH3BP13 241 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 PTP4A3O75365 173 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 KHDRBS3O75525 346 aaKnown RBP23.81■■□□□ 1.4
CBX4-202ENST00000448310 PPIAL4FP0DN26 164 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 TUBG1P23258 451 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 FPR2P25090 351 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 BTG1P62324 171 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 TMEM155Q4W5P6 130 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 FGD3Q5JSP0 725 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 PTCHD4Q6ZW05 846 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 GLB1L2Q8IW92 636 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 OR1F12Q8NHA8 337 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 OR2V2Q96R30 315 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 HOPXQ9BPY8 73 aaPredicted RBP23.81■■□□□ 1.4
CBX4-202ENST00000448310 NRIP3Q9NQ35 241 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 TUBG2Q9NRH3 451 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 PTTG3PQ9NZH4 202 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 IL19Q9UHD0 177 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 PPP1R3CQ9UQK1 317 aa23.81■■□□□ 1.4
CBX4-202ENST00000448310 RER1O15258 196 aa23.8■■□□□ 1.4
CBX4-202ENST00000448310 GPANK1O95872 356 aa23.8■■□□□ 1.4
CBX4-202ENST00000448310 H1F0P07305 194 aaKnown RBP23.8■■□□□ 1.4
CBX4-202ENST00000448310 SDHAP31040 664 aa23.8■■□□□ 1.4
CBX4-202ENST00000448310 UBA52P62987 128 aaKnown RBP23.8■■□□□ 1.4
CBX4-202ENST00000448310 HLXQ14774 488 aaPredicted RBP23.8■■□□□ 1.4
CBX4-202ENST00000448310 LRRC28Q86X40 367 aaPredicted RBP23.8■■□□□ 1.4
CBX4-202ENST00000448310 PTP4A1Q93096 173 aa23.8■■□□□ 1.4
CBX4-202ENST00000448310 KCTD14Q9BQ13 255 aaPredicted RBP23.8■■□□□ 1.4
CBX4-202ENST00000448310 NUAK2Q9H093 628 aa23.8■■□□□ 1.4
CBX4-202ENST00000448310 VSX1Q9NZR4 365 aaPredicted RBP23.8■■□□□ 1.4
CBX4-202ENST00000448310 IER3IP1Q9Y5U9 82 aa23.8■■□□□ 1.4
CBX4-202ENST00000448310 EGR1P18146 543 aa23.79■■□□□ 1.4
CBX4-202ENST00000448310 SLC6A9P48067 706 aa23.79■■□□□ 1.4
CBX4-202ENST00000448310 NUDT2P50583 147 aa23.79■■□□□ 1.4
CBX4-202ENST00000448310 FXYD6P3P58550 94 aa23.79■■□□□ 1.4
CBX4-202ENST00000448310 LSM6P62312 80 aaKnown RBP23.79■■□□□ 1.4
CBX4-202ENST00000448310 ZNF154Q13106 437 aa23.79■■□□□ 1.4
CBX4-202ENST00000448310 AWAT1Q58HT5 328 aa23.79■■□□□ 1.4
CBX4-202ENST00000448310 ARMCX4Q5H9R4 360 aa23.79■■□□□ 1.4
CBX4-202ENST00000448310 GPR139Q6DWJ6 353 aa23.79■■□□□ 1.4
CBX4-202ENST00000448310 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.79■■□□□ 1.4
CBX4-202ENST00000448310 SIGLECL1Q8N7X8 197 aa23.79■■□□□ 1.4
CBX4-202ENST00000448310 ATG16L2Q8NAA4 619 aa23.79■■□□□ 1.4
CBX4-202ENST00000448310 RSRC1Q96IZ7 334 aaKnown RBP23.79■■□□□ 1.4
CBX4-202ENST00000448310 CCDC134Q9H6E4 229 aa23.79■■□□□ 1.4
CBX4-202ENST00000448310 EFCAB1Q9HAE3 211 aa23.79■■□□□ 1.4
CBX4-202ENST00000448310 TRBV4-1A0A0J9YWV2 114 aa23.78■■□□□ 1.4
CBX4-202ENST00000448310 SURF4O15260 269 aa23.78■■□□□ 1.4
CBX4-202ENST00000448310 SPRY1O43609 319 aaPredicted RBP23.78■■□□□ 1.4
CBX4-202ENST00000448310 DIRAS1O95057 198 aa23.78■■□□□ 1.4
CBX4-202ENST00000448310 OMPP47874 163 aa23.78■■□□□ 1.4
CBX4-202ENST00000448310 SEC23BQ15437 767 aa23.78■■□□□ 1.4
CBX4-202ENST00000448310 OR10AD1Q8NGE0 317 aa23.78■■□□□ 1.4
CBX4-202ENST00000448310 POP5Q969H6 163 aaKnown RBP23.78■■□□□ 1.4
CBX4-202ENST00000448310 ZMYND19Q96E35 227 aaPredicted RBP23.78■■□□□ 1.4
CBX4-202ENST00000448310 COG8Q96MW5 612 aa23.78■■□□□ 1.4
CBX4-202ENST00000448310 TSSK2Q96PF2 358 aa23.78■■□□□ 1.4
CBX4-202ENST00000448310 GPX7Q96SL4 187 aaPredicted RBP23.78■■□□□ 1.4
CBX4-202ENST00000448310 DDX28Q9NUL7 540 aaKnown RBP23.78■■□□□ 1.4
CBX4-202ENST00000448310 ZNF446Q9NWS9 450 aa23.78■■□□□ 1.4
CBX4-202ENST00000448310 NDUFAF4Q9P032 175 aa23.78■■□□□ 1.4
CBX4-202ENST00000448310 ZNF69Q9UC07 566 aa23.78■■□□□ 1.4
CBX4-202ENST00000448310 POLR1DQ9Y2S0 133 aa23.78■■□□□ 1.4
CBX4-202ENST00000448310 AUP1Q9Y679 476 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms