RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 GABRG1Q8N1C3 465 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 FAM26EQ8N5C1 309 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 SPSB1Q96BD6 273 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 REEP6Q96HR9 211 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 R4GMQ9 66 aa7.78□□□□□ -1.16
PTPN3-204ENST00000446349 DOCK5Q9H7D0 1870 aa7.77□□□□□ -1.16
PTPN3-204ENST00000446349 OR2A25A4D2G3 310 aa7.77□□□□□ -1.16
PTPN3-204ENST00000446349 TRABD2BA6NFA1 517 aa7.77□□□□□ -1.16
PTPN3-204ENST00000446349 P2RY10O00398 339 aa7.77□□□□□ -1.16
PTPN3-204ENST00000446349 FGF17O60258 216 aa7.77□□□□□ -1.16
PTPN3-204ENST00000446349 ANXA7P20073 488 aaKnown RBP7.77□□□□□ -1.16
PTPN3-204ENST00000446349 ALDH3B1P43353 468 aa7.77□□□□□ -1.16
PTPN3-204ENST00000446349 IDH3GP51553 393 aaPredicted RBP7.77□□□□□ -1.16
PTPN3-204ENST00000446349 BPIFB3P59826 476 aa7.77□□□□□ -1.16
PTPN3-204ENST00000446349 SFXN4Q6P4A7 337 aa7.77□□□□□ -1.16
PTPN3-204ENST00000446349 BTNL3Q6UXE8 466 aa7.77□□□□□ -1.16
PTPN3-204ENST00000446349 APOOLQ6UXV4 268 aa7.77□□□□□ -1.16
PTPN3-204ENST00000446349 OR11G2Q8NGC1 345 aa7.77□□□□□ -1.16
PTPN3-204ENST00000446349 OR52I1Q8NGK6 324 aa7.77□□□□□ -1.16
PTPN3-204ENST00000446349 PFDN5Q99471 154 aa7.77□□□□□ -1.16
PTPN3-204ENST00000446349 IGLV3-16A0A075B6K0 115 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 HMGN4O00479 90 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 ARPC1BO15143 372 aaKnown RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 MAKP20794 623 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 CNR1P21554 472 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 TSPAN7P41732 249 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 KIR2DS2P43631 304 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 ASCL5Q7RTU5 278 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 OR2AK2Q8NG84 335 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 DEDD2Q8WXF8 326 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 RAB1CQ92928 201 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 UTP4Q969X6 686 aaKnown RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 C20orf85Q9H1P6 137 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 ANKRD10Q9NXR5 420 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 FKBP11Q9NYL4 201 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 A0A0U1RQS6 177 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 ICOSLGO75144 302 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 HLA-DMAP28067 261 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 THBS4P35443 961 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 MDH2P40926 338 aaKnown RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 PIGFQ07326 219 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 FUT7Q11130 342 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 ELFN2Q5R3F8 820 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 KDM4DQ6B0I6 523 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 IDO2Q6ZQW0 420 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 ANGPTL5Q86XS5 388 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 MRPS24Q96EL2 167 aaKnown RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 GABARAPL1Q9H0R8 117 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 MTCL1Q9Y4B5 1905 aaKnown RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 SSX4O60224 188 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 PRSS36Q5K4E3 855 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 STEAP1BQ6NZ63 245 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 TMEM200AQ86VY9 491 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 PELI3Q8N2H9 469 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 C15orf54Q8N8G6 183 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 NOXO1Q8NFA2 376 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 SLC29A1Q99808 456 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 ZFP64Q9NPA5 681 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 MRPL15Q9P015 296 aaKnown RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 IGHV1OR21-1A0A087WYE8 117 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 HLA-HP01893 362 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 SBK2P0C263 348 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 ADRA2CP18825 462 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 F2RP25116 425 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 DUSP1P28562 367 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 DIO1P49895 249 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 KHDC1LQ5JSQ8 128 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 HES3Q5TGS1 186 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 OR52W1Q6IF63 320 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 CD163Q86VB7 1156 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 LACC1Q8IV20 430 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 SDSLQ96GA7 329 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 ZNF436Q9C0F3 470 aaPredicted RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 FBXL4Q9UKA2 621 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 C20orf202A1L168 122 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 NRG2O14511 850 aaPredicted RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 TNFSF11O14788 317 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 NARSO43776 548 aaKnown RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 EMX1Q04741 257 aaPredicted RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 SMAD2Q15796 467 aaKnown RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 PNLIPRP3Q17RR3 467 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 SYT9Q86SS6 491 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 MEX3DQ86XN8 651 aaKnown RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 OR13G1Q8NGZ3 307 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 GNRHR2Q96P88 292 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 SEC22CQ9BRL7 303 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 MYEF2Q9P2K5 600 aaKnown RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 EBF1Q9UH73 591 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 NUP214P35658 2090 aaPredicted RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 A0A0A6YYD5 115 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 ANKRD61A6NGH8 418 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 PCP4L1A6NKN8 68 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 C1orf196B1AJZ1 125 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 PRSS44E7EML9 344 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 GMDSO60547 372 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 CISD3P0C7P0 127 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 CPEP16870 476 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 PSMB1P20618 241 aaKnown RBP7.77□□□□□ -1.17
PTPN3-204ENST00000446349 RHBDD2Q6NTF9 364 aa7.77□□□□□ -1.17
PTPN3-204ENST00000446349 ZNF546Q86UE3 836 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms