RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 MT-CO2P00403 227 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 RPLP1P05386 114 aaKnown RBP7.19□□□□□ -1.26
SMG1-202ENST00000446231 SEC13P55735 322 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 PCBP3P57721 371 aaKnown RBP7.19□□□□□ -1.26
SMG1-202ENST00000446231 RPP30P78346 268 aaKnown RBP7.19□□□□□ -1.26
SMG1-202ENST00000446231 SERTAD2Q14140 314 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 HABP2Q14520 560 aaPredicted RBP7.19□□□□□ -1.26
SMG1-202ENST00000446231 KDM3BQ7LBC6 1761 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 HIST1H1CP16403 213 aaKnown RBP7.19□□□□□ -1.26
SMG1-202ENST00000446231 HOXC8P31273 242 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 OR2A2Q6IF42 318 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 FAHD2BQ6P2I3 314 aaPredicted RBP7.19□□□□□ -1.26
SMG1-202ENST00000446231 SDSLQ96GA7 329 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 FAHD2AQ96GK7 314 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 ELLP55199 621 aaPredicted RBP7.19□□□□□ -1.26
SMG1-202ENST00000446231 DBX2Q6ZNG2 339 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 ETFBKMTQ8IXQ9 262 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 FAM71F1Q96KD3 344 aaPredicted RBP7.19□□□□□ -1.26
SMG1-202ENST00000446231 PLPP2O43688 288 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 MUC1P15941 1255 aaPredicted RBP7.19□□□□□ -1.26
SMG1-202ENST00000446231 PI3P19957 117 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 CASP6P55212 293 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 PTBP3O95758 552 aaKnown RBP7.19□□□□□ -1.26
SMG1-202ENST00000446231 EFNA3P52797 238 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 TPPP2P59282 170 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 UBE2V2Q15819 145 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 TIPARPQ7Z3E1 657 aaKnown RBP7.19□□□□□ -1.26
SMG1-202ENST00000446231 BORCS7Q96B45 105 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 SUSD2Q9UGT4 822 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 FBXO4Q9UKT5 387 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 ZFP92A6NM28 416 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 TAS2R30P59541 319 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 LTB4RQ15722 352 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 ACER2Q5QJU3 275 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 THNSL2Q86YJ6 484 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 MITD1Q8WV92 249 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 GPR87Q9BY21 358 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 GPR62Q9BZJ7 368 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 ARG1P05089 322 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 BCKDHBP21953 392 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 PRLHRP49683 370 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 MEP1BQ16820 701 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 FAM57BQ71RH2 274 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 SERINC5Q86VE9 423 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 COA4Q9NYJ1 87 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 A0A0B4J293 547 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 AQP7O14520 342 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 PHF1O43189 567 aaPredicted RBP7.19□□□□□ -1.26
SMG1-202ENST00000446231 SLC35A1P78382 337 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 PPP1R1AQ13522 171 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 LIPNQ5VXI9 398 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 RTL6Q6ICC9 239 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 DCBLD2Q96PD2 775 aa7.19□□□□□ -1.26
SMG1-202ENST00000446231 CACNA1SQ13698 1873 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 RPL7L1Q6DKI1 246 aaKnown RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 NKAIN3Q8N8D7 197 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 ISOC2Q96AB3 205 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 FGGYQ96C11 551 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 DTD2Q96FN9 168 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 KLHL13Q9P2N7 655 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 SLC23A2Q9UGH3 650 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 CCL27Q9Y4X3 112 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 FZD2Q14332 565 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 ZNF750Q32MQ0 723 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 ATPAF1Q5TC12 328 aaPredicted RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 ZNF770Q6IQ21 691 aaPredicted RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 OR52R1Q8NGF1 315 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 IRF7Q92985 503 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 ORAI1Q96D31 301 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 SLC22A7Q9Y694 548 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 LOXHD1Q8IVV2 1947 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 ZFPL1O95159 310 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 FAM199XQ6PEV8 388 aaPredicted RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 SLC22A13Q9Y226 551 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 TMEM272A0A1B0GTI8 110 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 DPP4P27487 766 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 NPBWR1P48145 328 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 SNX22Q96L94 193 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 RBFOX3A6NFN3 312 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 PEX12O00623 359 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 TMPRSS11DO60235 418 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 RPS18P62269 152 aaKnown RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 PLCXD2Q0VAA5 305 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 ZNF124Q15973 351 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 KDF1Q8NAX2 398 aaPredicted RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 LTN1O94822 1766 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 ZNF749O43361 778 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 FGF2P09038 288 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 DOC2BQ14184 412 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 CD14P08571 375 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 BCL6P41182 706 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 ANGPTL5Q86XS5 388 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 TAAR9Q96RI9 348 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 SIRT4Q9Y6E7 314 aaPredicted RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 SERINC4A6NH21 518 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 MRPS34P82930 218 aaKnown RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 GUCA2AQ02747 115 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 ENDOGQ14249 297 aaKnown RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 COL5A1-AS1Q5SY13 56 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 MFSD12Q6NUT3 480 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms