RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 PSMB11A5LHX3 300 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 TRPC5OSA6NMA1 111 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 C12orf77C9JDV5 145 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 SMKR1H3BMG3 65 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 PHF1O43189 567 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 ZNF354AO60765 605 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 CBR3O75828 277 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 CDK14O94921 469 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 PLEKHA8P1O95397 391 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 TDP2O95551 362 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 TACSTD2P09758 323 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 FOLR1P15328 257 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 PSMC3P17980 439 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 BTDP43251 543 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 CSNK1A1P48729 337 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 RPL34P49207 117 aaKnown RBP3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 CXCL6P80162 114 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 TGFBR3Q03167 851 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 ZNF763Q0D2J5 394 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 PRR4Q16378 134 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 KCTD19Q17RG1 926 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 HIGD2BQ4VC39 106 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 PAN3Q58A45 887 aaKnown RBP3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 C1orf100Q5SVJ3 147 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 C1orf146Q5VVC0 180 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 TMIGD1Q6UXZ0 262 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 TMEM150AQ86TG1 271 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 P2RY8Q86VZ1 359 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 SELENOHQ8IZQ5 122 aaKnown RBP3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 C17orf78Q8N4C9 275 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 NOXO1Q8NFA2 376 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 OR51S1Q8NGJ8 323 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 OR10R2Q8NGX6 335 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 EEF1AKMT3Q96AZ1 226 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 PIK3IP1Q96FE7 263 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 CATSPER2Q96P56 530 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 RIOK2Q9BVS4 552 aaKnown RBP3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 SMAD5-AS1Q9Y6J3 95 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 A2MP01023 1474 aa3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 SUPT6HQ7KZ85 1726 aaKnown RBP3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 XIRP1Q702N8 1843 aaKnown RBP3.33□□□□□ -1.88
HMGB1P48-201ENST00000446155 AK9Q5TCS8 1911 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 GOLGB1Q14789 3259 aaKnown RBP3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 A0A1B0GW15 77 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 A0A1W2PQ72 361 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 ZNF726A6NNF4 738 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 H3BN98 237 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 K7EMT4 169 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 PRMT5O14744 637 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 AGPAT2O15120 278 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 CALUO43852 315 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 ICOSLGO75144 302 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 LYPLA1O75608 230 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 LCA5LO95447 670 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 CST4P01036 141 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 OXTP01178 125 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 RPN2P04844 631 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 ARG1P05089 322 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 ZNF3P17036 446 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 IL32P24001 234 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 VDAC2P45880 294 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 SLC25A1P53007 311 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 ORC2Q13416 577 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 ZNF726P1Q15940 193 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 C5orf64Q2M2E5 130 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 C15orf32Q32M92 178 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 ZNF470Q6ECI4 717 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 Q6ZR54 194 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 VKORC1L1Q8N0U8 176 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 VN1R2Q8NFZ6 395 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 OR2A1Q8NGT9 310 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 OR9G1Q8NH87 305 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 DDI1Q8WTU0 396 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 RPEQ96AT9 228 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 DNAJC1Q96KC8 554 aaKnown RBP3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 FOXC2Q99958 501 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 NDEL1Q9GZM8 345 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 ARMC7Q9H6L4 198 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 MRM3Q9HC36 420 aaKnown RBP3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 VCX3AQ9NNX9 186 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 CLEC5AQ9NY25 188 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 V9GYY9 64 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 NCOA3Q9Y6Q9 1424 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 ABCC3O15438 1527 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 ARHGAP5Q13017 1502 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 AHDC1Q5TGY3 1603 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 COL22A1Q8NFW1 1626 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 CLTCQ00610 1675 aaKnown RBP3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 ATRXP46100 2492 aa3.32□□□□□ -1.88
HMGB1P48-201ENST00000446155 KIDINS220Q9ULH0 1771 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 SHPRHQ149N8 1683 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 DIP2AQ14689 1571 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 NCOA2Q15596 1464 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 RALGAPBQ86X10 1494 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 ARHGAP23Q9P227 1491 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 TMEM2Q9UHN6 1383 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 MROH7Q68CQ1 1323 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 A0A087WWV3 80 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 A0A0G2JLM5 398 aa3.31□□□□□ -1.88
HMGB1P48-201ENST00000446155 NUPL2O15504 423 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms