RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 MBNL2Q5VZF2 373 aaKnown RBP12.59□□□□□ -0.39
USE1-202ENST00000445667 CORO6Q6QEF8 472 aa12.59□□□□□ -0.39
USE1-202ENST00000445667 RASSF6Q6ZTQ3 369 aa12.59□□□□□ -0.39
USE1-202ENST00000445667 ADGRG5Q8IZF4 528 aa12.59□□□□□ -0.39
USE1-202ENST00000445667 NPEPL1Q8NDH3 523 aa12.59□□□□□ -0.39
USE1-202ENST00000445667 OR52L1Q8NGH7 329 aa12.59□□□□□ -0.39
USE1-202ENST00000445667 OR1F12Q8NHA8 337 aa12.59□□□□□ -0.39
USE1-202ENST00000445667 CANT1Q8WVQ1 401 aa12.59□□□□□ -0.39
USE1-202ENST00000445667 SLC7A6OSQ96CW6 309 aaPredicted RBP12.59□□□□□ -0.39
USE1-202ENST00000445667 MSI2Q96DH6 328 aaKnown RBP12.59□□□□□ -0.39
USE1-202ENST00000445667 SNX18Q96RF0 628 aa12.59□□□□□ -0.39
USE1-202ENST00000445667 CHID1Q9BWS9 393 aa12.59□□□□□ -0.39
USE1-202ENST00000445667 IL20Q9NYY1 176 aa12.59□□□□□ -0.39
USE1-202ENST00000445667 STARD10Q9Y365 291 aa12.59□□□□□ -0.39
USE1-202ENST00000445667 LHFPL6Q9Y693 200 aa12.59□□□□□ -0.39
USE1-202ENST00000445667 LOC100289279A0A1B0GTE1 492 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 OR6C6A6NF89 314 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 BHLHE40O14503 412 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 SPRY3O43610 288 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 ICMTO60725 284 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 CST1P01037 141 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 TACSTD2P09758 323 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 ACHEP22303 614 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 ZNF81P51508 661 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 MMP15P51511 669 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 TEKQ02763 1124 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 RPL13AP3Q6NVV1 102 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 PGM2L1Q6PCE3 622 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 ARL9Q6T311 187 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 ZBTB46Q86UZ6 589 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 HIPK1Q86Z02 1210 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 CYB561A3Q8NBI2 242 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 SLC26A10Q8NG04 563 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 POP5Q969H6 163 aaKnown RBP12.58□□□□□ -0.4
USE1-202ENST00000445667 TSSK6Q9BXA6 273 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 RACGAP1Q9H0H5 632 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 NARFLQ9H6Q4 476 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 CHODLQ9H9P2 273 aa12.58□□□□□ -0.4
USE1-202ENST00000445667 ZNF275Q9NSD4 429 aaPredicted RBP12.58□□□□□ -0.4
USE1-202ENST00000445667 AQP12BA6NM10 295 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 KIAA1324LA8MWY0 1029 aaPredicted RBP12.57□□□□□ -0.4
USE1-202ENST00000445667 TPD52L2O43399 206 aaKnown RBP12.57□□□□□ -0.4
USE1-202ENST00000445667 LMX1BO60663 402 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 RP2O75695 350 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 SOX14O95416 240 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 IGHV1-46P01743 117 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 HLA-DQA2P01906 255 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 MT-ND5P03915 603 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 PYCR1P32322 319 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 GPR6P46095 362 aaPredicted RBP12.57□□□□□ -0.4
USE1-202ENST00000445667 ERFP50548 548 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 CHN2P52757 468 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 HIST1H3AP68431 136 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 PSG7Q13046 419 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 PCGF3Q3KNV8 242 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 DNAL1Q4LDG9 190 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 ZNF362Q5T0B9 420 aaPredicted RBP12.57□□□□□ -0.4
USE1-202ENST00000445667 HIST2H3PS2Q5TEC6 136 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 HIST2H3AQ71DI3 136 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 LINC00346Q8IVM7 164 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 AQP12AQ8IXF9 295 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 C1orf174Q8IYL3 243 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 GJC3Q8NFK1 279 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 OR10G2Q8NGC3 310 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 ZNRF4Q8WWF5 429 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 DDOQ99489 341 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 NIPSNAP1Q9BPW8 284 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 DGCR6LQ9BY27 220 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 DECR2Q9NUI1 292 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 TBC1D23Q9NUY8 699 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 TBCCD1Q9NVR7 557 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 NKIRAS2Q9NYR9 191 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 KLHL21Q9UJP4 597 aa12.57□□□□□ -0.4
USE1-202ENST00000445667 PLSCR5A0PG75 271 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 DHRS12A0PJE2 317 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 ZSCAN5BA6NJL1 495 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 WNT9BO14905 357 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 PPIHO43447 177 aaKnown RBP12.56□□□□□ -0.4
USE1-202ENST00000445667 TGFAP01135 160 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 TMEM33P57088 247 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 MRPS11P82912 194 aaKnown RBP12.56□□□□□ -0.4
USE1-202ENST00000445667 COX10Q12887 443 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 CCNIQ14094 377 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 FLOT2Q14254 428 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 RSPO1Q2MKA7 263 aaPredicted RBP12.56□□□□□ -0.4
USE1-202ENST00000445667 FAM166AQ6J272 317 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 TMEM179BQ7Z7N9 219 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 SPATA24Q86W54 205 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 LNX2Q8N448 690 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 SLC37A3Q8NCC5 494 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 OR51L1Q8NGJ5 315 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 OR4Q3Q8NH05 313 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 GIPC3Q8TF64 312 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 CMBLQ96DG6 245 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 FEVQ99581 238 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 CDADC1Q9BWV3 514 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 MSL2Q9HCI7 577 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 ARMC1Q9NVT9 282 aa12.56□□□□□ -0.4
USE1-202ENST00000445667 MRPL22Q9NWU5 206 aaKnown RBP12.56□□□□□ -0.4
USE1-202ENST00000445667 CACNG2Q9Y698 323 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms