RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 METTL9Q9H1A3 318 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 DHX35Q9H5Z1 703 aaKnown RBP3.75□□□□□ -1.81
VPS50-206ENST00000443443 ISYNA1Q9NPH2 558 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 SLC2A9Q9NRM0 540 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 EXD2Q9NVH0 621 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 THUMPD1Q9NXG2 353 aaKnown RBP3.75□□□□□ -1.81
VPS50-206ENST00000443443 OPN4Q9UHM6 478 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 CYB5R1Q9UHQ9 305 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 LGALS13Q9UHV8 139 aa3.75□□□□□ -1.81
VPS50-206ENST00000443443 ABCA7Q8IZY2 2146 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 NEDD4P46934 1319 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 TRBV7-9A0A0J9YWB2 115 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 A0A1B0GVI7 797 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 GNG14A0A1W2PPG7 69 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 ANKRD20A5PA0PJZ0 165 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 FTCDNL1E5RQL4 147 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 H7C2Y5 167 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 NACADO15069 1562 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 RAMP1O60894 148 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 CLDN11O75508 207 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 EEDO75530 441 aaKnown RBP3.74□□□□□ -1.81
VPS50-206ENST00000443443 TRAPPC6AO75865 159 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 CEACAM4O75871 244 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 SEC24AO95486 1093 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 TDP2O95551 362 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 ATP6V1G2O95670 118 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 SNAP29O95721 258 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 RAB36O95755 333 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 SERPINA5P05154 406 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 LGALS2P05162 132 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 CALB1P05937 261 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 GNAO1P09471 354 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 HOXB7P09629 217 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 ACSM4P0C7M7 580 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 SLC2A2P11168 524 aaPredicted RBP3.74□□□□□ -1.81
VPS50-206ENST00000443443 HIST1H1CP16403 213 aaKnown RBP3.74□□□□□ -1.81
VPS50-206ENST00000443443 SERPINA2P20848 420 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 C4BPBP20851 252 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 CMA1P23946 247 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 OR1E1P30953 314 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 ELK3P41970 407 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 TSFMP43897 325 aaKnown RBP3.74□□□□□ -1.81
VPS50-206ENST00000443443 OR3A2P47893 321 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 AP2S1P53680 142 aaPredicted RBP3.74□□□□□ -1.81
VPS50-206ENST00000443443 DHODHQ02127 395 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 AESQ08117 197 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 RAB31Q13636 194 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 EMC2Q15006 297 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 CD226Q15762 336 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 TIGITQ495A1 244 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 UNC50Q53HI1 259 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 RESP18Q5W5W9 173 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 DRAM2Q6UX65 266 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 MRPL52Q86TS9 123 aaKnown RBP3.74□□□□□ -1.81
VPS50-206ENST00000443443 VKORC1L1Q8N0U8 176 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 C2orf73Q8N5S3 287 aaPredicted RBP3.74□□□□□ -1.81
VPS50-206ENST00000443443 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.74□□□□□ -1.81
VPS50-206ENST00000443443 CATSPER1Q8NEC5 780 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 DUSP18Q8NEJ0 188 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 CCDC54Q8NEL0 328 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 PRSS33Q8NF86 280 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 OR4D10Q8NGI6 311 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 OR1K1Q8NGR3 316 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 OR51A7Q8NH64 312 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 ZNF502Q8TBZ5 544 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 SFXN5Q8TD22 340 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 BLOC1S5Q8TDH9 187 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 PYROXD1Q8WU10 500 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 TFB1MQ8WVM0 346 aaKnown RBP3.74□□□□□ -1.81
VPS50-206ENST00000443443 WDR34Q96EX3 536 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 DNAJA3Q96EY1 480 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 PRRT1Q99946 306 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 KLHDC3Q9BQ90 382 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 FAIM2Q9BWQ8 316 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 CHRNA10Q9GZZ6 450 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 DSN1Q9H410 356 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 ZNF385DQ9H6B1 395 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 C12orf10Q9HB07 376 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 NMUR1Q9HB89 426 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 ESM1Q9NQ30 184 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 IFT46Q9NQC8 304 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 SPANXB1Q9NS25 103 aaPredicted RBP3.74□□□□□ -1.81
VPS50-206ENST00000443443 SEC14L4Q9UDX3 406 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 ZNF337Q9Y3M9 751 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 CACNG2Q9Y698 323 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 USH1CQ9Y6N9 552 aa3.74□□□□□ -1.81
VPS50-206ENST00000443443 A0A1W2PR80 420 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 FUOMA2VDF0 154 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 GJE1A6NN92 205 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 ERVV-1B6SEH8 477 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 CCL21O00585 134 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 TGOLN2O43493 480 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 SSNA1O43805 119 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 PRKYO43930 277 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 HLA-AP01891 365 aaKnown RBP3.73□□□□□ -1.81
VPS50-206ENST00000443443 CATP04040 527 aaKnown RBP3.73□□□□□ -1.81
VPS50-206ENST00000443443 CDK1P06493 297 aa3.73□□□□□ -1.81
VPS50-206ENST00000443443 RPL35AP18077 110 aaKnown RBP3.73□□□□□ -1.81
VPS50-206ENST00000443443 PVALBP20472 110 aaPredicted RBP3.73□□□□□ -1.81
VPS50-206ENST00000443443 M6PRP20645 277 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms