RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 CPPED1Q9BRF8 314 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-208ENST00000443046 WACQ9BTA9 647 aa11.97□□□□□ -0.49
HMGN1-208ENST00000443046 CDADC1Q9BWV3 514 aa11.97□□□□□ -0.49
HMGN1-208ENST00000443046 C5orf63A6NC05 138 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 EVPLLA8MZ36 301 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 C22orf46C9J442 243 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 PHYHO14832 338 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 CYB5R3P00387 301 aaPredicted RBP11.96□□□□□ -0.49
HMGN1-208ENST00000443046 MMP9P14780 707 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 RAC2P15153 192 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 RBM34P42696 430 aaKnown RBP11.96□□□□□ -0.49
HMGN1-208ENST00000443046 PITPNBP48739 271 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 CRYBA2P53672 197 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 CD47Q08722 323 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 LAPTM4AQ15012 233 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 RUNDC3AQ59EK9 446 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 WDR25Q64LD2 544 aaPredicted RBP11.96□□□□□ -0.49
HMGN1-208ENST00000443046 Q6ZPA2 131 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 NKAIN4Q8IVV8 208 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 CLDN22Q8N7P3 220 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 C11orf65Q8NCR3 313 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 OR8B3Q8NGG8 313 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 FAM110DQ8TAY7 271 aaPredicted RBP11.96□□□□□ -0.49
HMGN1-208ENST00000443046 FNDC8Q8TC99 324 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 MEGF10Q96KG7 1140 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 RBP7Q96R05 134 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 OR8B2Q96RD0 313 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 C16orf95Q9H693 158 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 TCF7L1Q9HCS4 588 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 CLN8Q9UBY8 286 aa11.96□□□□□ -0.49
HMGN1-208ENST00000443046 PLXNB1O43157 2135 aa11.96□□□□□ -0.5
HMGN1-208ENST00000443046 CENPVL3A0A0U1RRI6 287 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 A0A1B0GWJ7 208 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 C12orf71A8MTZ7 269 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 H0YL77 283 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 P2RY10O00398 339 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 GPR137BO60478 399 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 MSR1P21757 451 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 CFHR2P36980 270 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 PSMB10P40306 273 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 PMELP40967 661 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 IER3P46695 156 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 GUCY1A3Q02108 690 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 LYPD2Q6UXB3 125 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 NLRC3Q7RTR2 1065 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 TBC1D15Q8TC07 691 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 TMEM255BQ8WV15 326 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 TAMM41Q96BW9 452 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 SGTBQ96EQ0 304 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 COG8Q96MW5 612 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 TBX15Q96SF7 602 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 POLE4Q9NR33 117 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 CCDC167Q9P0B6 97 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 HIF3AQ9Y2N7 669 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 TENM3Q9P273 2699 aa11.95□□□□□ -0.5
HMGN1-208ENST00000443046 G3V4G9 280 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 MLNRO43193 412 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 ENSAO43768 121 aaKnown RBP11.94□□□□□ -0.5
HMGN1-208ENST00000443046 IGHV4-59P01825 116 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 SFTPBP07988 381 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 RPL27P61353 136 aaKnown RBP11.94□□□□□ -0.5
HMGN1-208ENST00000443046 C2orf68Q2NKX9 166 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 TTMPQ5BVD1 217 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 FAM201AQ5SY85 155 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 FBXW12Q6X9E4 464 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 DCDC5Q6ZRR9 648 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 Q6ZSV7 163 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 VASH1Q7L8A9 365 aaPredicted RBP11.94□□□□□ -0.5
HMGN1-208ENST00000443046 LDLRAD3Q86YD5 345 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 SLC30A8Q8IWU4 369 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 ANKRD42Q8N9B4 389 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 ATG16L2Q8NAA4 619 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 OR8G5Q8NG78 346 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 OR10AD1Q8NGE0 317 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 OR13G1Q8NGZ3 307 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 TMEM239Q8WW34 195 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 PCGF1Q9BSM1 259 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 ACOXLQ9NUZ1 547 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 USH1CQ9Y6N9 552 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 NOTCH3Q9UM47 2321 aa11.94□□□□□ -0.5
HMGN1-208ENST00000443046 ZNF879B4DU55 563 aa11.93□□□□□ -0.5
HMGN1-208ENST00000443046 C3orf80F5H4A9 247 aa11.93□□□□□ -0.5
HMGN1-208ENST00000443046 J3QW42 95 aa11.93□□□□□ -0.5
HMGN1-208ENST00000443046 GUCA1AP43080 201 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-208ENST00000443046 GATA4P43694 442 aa11.93□□□□□ -0.5
HMGN1-208ENST00000443046 SRP9P49458 86 aaKnown RBP11.93□□□□□ -0.5
HMGN1-208ENST00000443046 SLC18A1P54219 525 aa11.93□□□□□ -0.5
HMGN1-208ENST00000443046 STX1BP61266 288 aa11.93□□□□□ -0.5
HMGN1-208ENST00000443046 ALG10Q5BKT4 473 aa11.93□□□□□ -0.5
HMGN1-208ENST00000443046 SAMD5Q5TGI4 173 aa11.93□□□□□ -0.5
HMGN1-208ENST00000443046 WDR93Q6P2C0 686 aa11.93□□□□□ -0.5
HMGN1-208ENST00000443046 PATL1Q86TB9 770 aaKnown RBP11.93□□□□□ -0.5
HMGN1-208ENST00000443046 MOGAT3Q86VF5 341 aa11.93□□□□□ -0.5
HMGN1-208ENST00000443046 LRRC75AQ8NAA5 344 aa11.93□□□□□ -0.5
HMGN1-208ENST00000443046 PCYOX1LQ8NBM8 494 aa11.93□□□□□ -0.5
HMGN1-208ENST00000443046 LRRC8CQ8TDW0 803 aa11.93□□□□□ -0.5
HMGN1-208ENST00000443046 GATAD2BQ8WXI9 593 aa11.93□□□□□ -0.5
HMGN1-208ENST00000443046 TET2Q6N021 2002 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-208ENST00000443046 A0A1W2PPL8 197 aa11.92□□□□□ -0.5
HMGN1-208ENST00000443046 TMEM120BA0PK00 339 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms