RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 CAPZA1P52907 286 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 SSBP1Q04837 148 aaKnown RBP9.29□□□□□ -0.92
CPNE1-218ENST00000439806 SPOCK1Q08629 439 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 ZNF239Q16600 458 aaKnown RBP9.29□□□□□ -0.92
CPNE1-218ENST00000439806 PCGF3Q3KNV8 242 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 RAET1LQ5VY80 246 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 FAM166AQ6J272 317 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 SLC25A25Q6KCM7 469 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 SLC25A47Q6Q0C1 308 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 ZNF782Q6ZMW2 699 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-218ENST00000439806 ADGRE4PQ86SQ3 457 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 BEST4Q8NFU0 473 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 OR1J4Q8NGS1 313 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 OR6X1Q8NH79 312 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 ZNF431Q8TF32 576 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-218ENST00000439806 DEDD2Q8WXF8 326 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 JSRP1Q96MG2 331 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-218ENST00000439806 NAA11Q9BSU3 229 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-218ENST00000439806 ANGPTL4Q9BY76 406 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 MRPL13Q9BYD1 178 aaKnown RBP9.29□□□□□ -0.92
CPNE1-218ENST00000439806 PBOV1Q9GZY1 135 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 MOB1AQ9H8S9 216 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 NOX3Q9HBY0 568 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 ZNF160Q9HCG1 818 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 HPF1Q9NWY4 346 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 MTFP1Q9UDX5 166 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 CGGBP1Q9UFW8 167 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-218ENST00000439806 GDF2Q9UK05 429 aaPredicted RBP9.29□□□□□ -0.92
CPNE1-218ENST00000439806 FLVCR2Q9UPI3 526 aa9.29□□□□□ -0.92
CPNE1-218ENST00000439806 DCDC2BA2VCK2 349 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 B4E171 279 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 SULT1C2O00338 296 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 SYT7O43581 403 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 KDM4BO94953 1096 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 NDUFB6O95139 128 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 TGM6O95932 706 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 ALDOBP05062 364 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 AKAIN1P0CW23 69 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 CCL3P10147 92 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 GTF2F2P13984 249 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 LIFP15018 202 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 ZNF20P17024 532 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 BDKRB2P30411 391 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 GNALP38405 381 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 TSPAN7P41732 249 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 MMP16P51512 607 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 P2RY4P51582 365 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 DSCR4P56555 118 aaPredicted RBP9.28□□□□□ -0.92
CPNE1-218ENST00000439806 CLDN17P56750 224 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 MLF1P58340 268 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 PSMA6P60900 246 aaKnown RBP9.28□□□□□ -0.92
CPNE1-218ENST00000439806 FOXK1P85037 733 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 GUCA2AQ02747 115 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 LPAL2Q16609 132 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 LINC00303Q3SY05 128 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 TMEM255AQ5JRV8 349 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 GLYATL3Q5SZD4 288 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 ASPHD2Q6ICH7 369 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 NHLRC1Q6VVB1 395 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 DNM1P46Q6ZS02 220 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 TMPPEQ6ZT21 453 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 ZNF627Q7L945 461 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 RPS19BP1Q86WX3 136 aaKnown RBP9.28□□□□□ -0.92
CPNE1-218ENST00000439806 ELMOD2Q8IZ81 293 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 GTPBP8Q8N3Z3 284 aaPredicted RBP9.28□□□□□ -0.92
CPNE1-218ENST00000439806 OR11G2Q8NGC1 345 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 LILRB4Q8NHJ6 448 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 SLC25A28Q96A46 364 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 SORCS2Q96PQ0 1159 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 RYDENQ9NUL5 291 aaKnown RBP9.28□□□□□ -0.92
CPNE1-218ENST00000439806 FAM206AQ9NX38 181 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 CYB5R1Q9UHQ9 305 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 HSPB11Q9Y547 144 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 CACNA1CQ13936 2221 aa9.28□□□□□ -0.92
CPNE1-218ENST00000439806 COL27A1Q8IZC6 1860 aaPredicted RBP9.28□□□□□ -0.92
CPNE1-218ENST00000439806 MEIKINA0A087WXM9 373 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 LOC101059948A0A1B0GTJ6 334 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 LOC102725191A0A1B0GVB3 256 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 CIB4A0PJX0 185 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 A6NL46 340 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 ZNF814B7Z6K7 855 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 LMX1BO60663 402 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 ZNF780AO75290 641 aaPredicted RBP9.27□□□□□ -0.93
CPNE1-218ENST00000439806 KLF7O75840 302 aaPredicted RBP9.27□□□□□ -0.93
CPNE1-218ENST00000439806 TTRP02766 147 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 IL5P05113 134 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 GP1BAP07359 652 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 QDPRP09417 244 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 ACSM4P0C7M7 580 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 GABRA1P14867 456 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 SDHBP21912 280 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 ACP1P24666 158 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 OTX2P32243 289 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 GUCA1AP43080 201 aaPredicted RBP9.27□□□□□ -0.93
CPNE1-218ENST00000439806 RAD52P43351 418 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 CSNK1A1P48729 337 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 ACTBP60709 375 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 SNRPD2P62316 118 aaKnown RBP9.27□□□□□ -0.93
CPNE1-218ENST00000439806 ACTG1P63261 375 aa9.27□□□□□ -0.93
CPNE1-218ENST00000439806 KCNMB1Q16558 191 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms