RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 ZBTB46Q86UZ6 589 aa20.54■□□□□ 0.88
CPNE1-217ENST00000439669 CYB561A3Q8NBI2 242 aa20.54■□□□□ 0.88
CPNE1-217ENST00000439669 NPEPL1Q8NDH3 523 aa20.54■□□□□ 0.88
CPNE1-217ENST00000439669 OR1F12Q8NHA8 337 aa20.54■□□□□ 0.88
CPNE1-217ENST00000439669 SLC7A6Q92536 515 aa20.54■□□□□ 0.88
CPNE1-217ENST00000439669 ARMC1Q9NVT9 282 aa20.54■□□□□ 0.88
CPNE1-217ENST00000439669 GRIP1Q9Y3R0 1128 aa20.54■□□□□ 0.88
CPNE1-217ENST00000439669 LHFPL6Q9Y693 200 aa20.54■□□□□ 0.88
CPNE1-217ENST00000439669 CHD3Q12873 2000 aaKnown RBP20.54■□□□□ 0.88
CPNE1-217ENST00000439669 GSC2O15499 205 aa20.53■□□□□ 0.88
CPNE1-217ENST00000439669 E2F6O75461 281 aa20.53■□□□□ 0.88
CPNE1-217ENST00000439669 NCR1O76036 304 aa20.53■□□□□ 0.88
CPNE1-217ENST00000439669 GIFP27352 417 aa20.53■□□□□ 0.88
CPNE1-217ENST00000439669 MAGEB1P43366 347 aa20.53■□□□□ 0.88
CPNE1-217ENST00000439669 TEKQ02763 1124 aa20.53■□□□□ 0.88
CPNE1-217ENST00000439669 SLC36A3Q495N2 470 aa20.53■□□□□ 0.88
CPNE1-217ENST00000439669 ELFN2Q5R3F8 820 aa20.53■□□□□ 0.88
CPNE1-217ENST00000439669 MBNL2Q5VZF2 373 aaKnown RBP20.53■□□□□ 0.88
CPNE1-217ENST00000439669 CORO6Q6QEF8 472 aa20.53■□□□□ 0.88
CPNE1-217ENST00000439669 GJC3Q8NFK1 279 aa20.53■□□□□ 0.88
CPNE1-217ENST00000439669 GTF3AQ92664 365 aaKnown RBP20.53■□□□□ 0.88
CPNE1-217ENST00000439669 NIPSNAP1Q9BPW8 284 aa20.53■□□□□ 0.88
CPNE1-217ENST00000439669 CADM1Q9BY67 442 aaKnown RBP20.53■□□□□ 0.88
CPNE1-217ENST00000439669 YY1AP1Q9H869 796 aa20.53■□□□□ 0.88
CPNE1-217ENST00000439669 BAIAP2Q9UQB8 552 aa20.53■□□□□ 0.88
CPNE1-217ENST00000439669 OR6C6A6NF89 314 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 H3BSA7 217 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 TFP02787 698 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 PYCR1P32322 319 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 CBX1P83916 185 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 PCGF3Q3KNV8 242 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 LINC00346Q8IVM7 164 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 LNX2Q8N448 690 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 PROKR2Q8NFJ6 384 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 OR2T33Q8NG76 320 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 OR4Q3Q8NH05 313 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 RDH5Q92781 318 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 FEVQ99581 238 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 CDADC1Q9BWV3 514 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 HDHD2Q9H0R4 259 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 TBCCD1Q9NVR7 557 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 PDP1Q9P0J1 537 aaPredicted RBP20.52■□□□□ 0.88
CPNE1-217ENST00000439669 ZANQ9Y493 2812 aa20.52■□□□□ 0.88
CPNE1-217ENST00000439669 TCRBV3S1A0A5B6 114 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 PLSCR5A0PG75 271 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 ARRDC5A6NEK1 342 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 TPD52L2O43399 206 aaKnown RBP20.51■□□□□ 0.87
CPNE1-217ENST00000439669 FKBP6O75344 327 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 IGHV4-31P0DP07 118 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 RASSF2P50749 326 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 ZNF81P51508 661 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 CCL8P80075 99 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 COX10Q12887 443 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 C6orf52Q5T4I8 152 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 SLC37A3Q8NCC5 494 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 OR2AJ1Q8NGZ0 328 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 OR2T4Q8NH00 348 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 TEX47Q8TBZ9 253 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 CHODLQ9H9P2 273 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 ATPIF1Q9UII2 106 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 KLHL21Q9UJP4 597 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 NSD1Q96L73 2696 aaPredicted RBP20.51■□□□□ 0.87
CPNE1-217ENST00000439669 ZFHX3Q15911 3703 aa20.51■□□□□ 0.87
CPNE1-217ENST00000439669 H3BN98 237 aa20.5■□□□□ 0.87
CPNE1-217ENST00000439669 DBHP09172 617 aa20.5■□□□□ 0.87
CPNE1-217ENST00000439669 ZNF16P17020 682 aaPredicted RBP20.5■□□□□ 0.87
CPNE1-217ENST00000439669 ZNF23P17027 643 aa20.5■□□□□ 0.87
CPNE1-217ENST00000439669 COL8A2P25067 703 aa20.5■□□□□ 0.87
CPNE1-217ENST00000439669 GZMKP49863 264 aa20.5■□□□□ 0.87
CPNE1-217ENST00000439669 RIN1Q13671 783 aa20.5■□□□□ 0.87
CPNE1-217ENST00000439669 TSTQ16762 297 aaKnown RBP20.5■□□□□ 0.87
CPNE1-217ENST00000439669 TMEM255AQ5JRV8 349 aa20.5■□□□□ 0.87
CPNE1-217ENST00000439669 CYB5R2Q6BCY4 276 aa20.5■□□□□ 0.87
CPNE1-217ENST00000439669 SLC18B1Q6NT16 456 aa20.5■□□□□ 0.87
CPNE1-217ENST00000439669 TMEM179BQ7Z7N9 219 aa20.5■□□□□ 0.87
CPNE1-217ENST00000439669 OR9Q1Q8NGQ5 310 aa20.5■□□□□ 0.87
CPNE1-217ENST00000439669 DDOQ99489 341 aa20.5■□□□□ 0.87
CPNE1-217ENST00000439669 COQ7Q99807 217 aa20.5■□□□□ 0.87
CPNE1-217ENST00000439669 POFUT1Q9H488 388 aa20.5■□□□□ 0.87
CPNE1-217ENST00000439669 NF1P21359 2839 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 LRP5LA4QPB2 252 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 A8MV72 311 aaPredicted RBP20.49■□□□□ 0.87
CPNE1-217ENST00000439669 SPRY3O43610 288 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 TIMM8AO60220 97 aaPredicted RBP20.49■□□□□ 0.87
CPNE1-217ENST00000439669 ATP5HO75947 161 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 IFNGP01579 166 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 ZNF823P16415 610 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 ACHEP22303 614 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 CHN2P52757 468 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 HIST1H3AP68431 136 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 CRMP1Q14194 572 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 HIST2H3PS2Q5TEC6 136 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 CD300LDQ6UXZ3 194 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 CFAP77Q6ZQR2 320 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 HIST2H3AQ71DI3 136 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 OR51L1Q8NGJ5 315 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 YIPF5Q969M3 257 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 COG8Q96MW5 612 aa20.49■□□□□ 0.87
CPNE1-217ENST00000439669 DCLRE1CQ96SD1 692 aaKnown RBP20.49■□□□□ 0.87
CPNE1-217ENST00000439669 PITX2Q99697 317 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms