RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 TINAGQ9UJW2 476 aa8.84□□□□□ -0.99
CBX5-202ENST00000439541 NOSIPQ9Y314 301 aaKnown RBP8.84□□□□□ -0.99
CBX5-202ENST00000439541 FAM215AQ9Y5M1 114 aa8.84□□□□□ -0.99
CBX5-202ENST00000439541 FKBP7Q9Y680 259 aa8.84□□□□□ -0.99
CBX5-202ENST00000439541 A0A1W2PPL8 197 aa8.83□□□□□ -1
CBX5-202ENST00000439541 IGHA1P01876 353 aa8.83□□□□□ -1
CBX5-202ENST00000439541 HLA-DQA2P01906 255 aa8.83□□□□□ -1
CBX5-202ENST00000439541 QDPRP09417 244 aa8.83□□□□□ -1
CBX5-202ENST00000439541 SBK2P0C263 348 aa8.83□□□□□ -1
CBX5-202ENST00000439541 CLEC2LP0C7M8 214 aa8.83□□□□□ -1
CBX5-202ENST00000439541 FCGR2AP12318 317 aa8.83□□□□□ -1
CBX5-202ENST00000439541 CAPZA2P47755 286 aa8.83□□□□□ -1
CBX5-202ENST00000439541 INPP1P49441 399 aa8.83□□□□□ -1
CBX5-202ENST00000439541 GGTLC2Q14390 218 aa8.83□□□□□ -1
CBX5-202ENST00000439541 RNPS1Q15287 305 aaKnown RBP8.83□□□□□ -1
CBX5-202ENST00000439541 HIST3H3Q16695 136 aa8.83□□□□□ -1
CBX5-202ENST00000439541 KRTCAP3Q53RY4 240 aa8.83□□□□□ -1
CBX5-202ENST00000439541 SLC35D3Q5M8T2 416 aa8.83□□□□□ -1
CBX5-202ENST00000439541 C1QTNF12Q5T7M4 302 aa8.83□□□□□ -1
CBX5-202ENST00000439541 TSPO2Q5TGU0 170 aa8.83□□□□□ -1
CBX5-202ENST00000439541 LRFN4Q6PJG9 635 aa8.83□□□□□ -1
CBX5-202ENST00000439541 SSX6Q7RTT6 188 aa8.83□□□□□ -1
CBX5-202ENST00000439541 HDDC2Q7Z4H3 204 aa8.83□□□□□ -1
CBX5-202ENST00000439541 LIX1LQ8IVB5 337 aa8.83□□□□□ -1
CBX5-202ENST00000439541 C20orf196Q8IYI0 205 aa8.83□□□□□ -1
CBX5-202ENST00000439541 ZNF485Q8NCK3 441 aa8.83□□□□□ -1
CBX5-202ENST00000439541 OR10H4Q8NGA5 316 aa8.83□□□□□ -1
CBX5-202ENST00000439541 FAM57AQ8TBR7 257 aa8.83□□□□□ -1
CBX5-202ENST00000439541 TMEM54Q969K7 222 aa8.83□□□□□ -1
CBX5-202ENST00000439541 CNN2Q99439 309 aaKnown RBP8.83□□□□□ -1
CBX5-202ENST00000439541 TM9SF2Q99805 663 aa8.83□□□□□ -1
CBX5-202ENST00000439541 SOSTQ9BQB4 213 aa8.83□□□□□ -1
CBX5-202ENST00000439541 GON7Q9BXV9 100 aa8.83□□□□□ -1
CBX5-202ENST00000439541 ULBP2Q9BZM5 246 aa8.83□□□□□ -1
CBX5-202ENST00000439541 PPP1R3EQ9H7J1 279 aa8.83□□□□□ -1
CBX5-202ENST00000439541 MRPL22Q9NWU5 206 aaKnown RBP8.83□□□□□ -1
CBX5-202ENST00000439541 GLTPQ9NZD2 209 aa8.83□□□□□ -1
CBX5-202ENST00000439541 EMC3Q9P0I2 261 aa8.83□□□□□ -1
CBX5-202ENST00000439541 COPS3Q9UNS2 423 aa8.83□□□□□ -1
CBX5-202ENST00000439541 RCE1Q9Y256 329 aa8.83□□□□□ -1
CBX5-202ENST00000439541 KLHDC2Q9Y2U9 406 aa8.83□□□□□ -1
CBX5-202ENST00000439541 LINC00854A0A1B0GVQ3 168 aa8.82□□□□□ -1
CBX5-202ENST00000439541 C12orf71A8MTZ7 269 aa8.82□□□□□ -1
CBX5-202ENST00000439541 PRR32B1ATL7 298 aa8.82□□□□□ -1
CBX5-202ENST00000439541 J3QRE1 110 aa8.82□□□□□ -1
CBX5-202ENST00000439541 MAGEB4O15481 346 aaPredicted RBP8.82□□□□□ -1
CBX5-202ENST00000439541 ORC5O43913 435 aa8.82□□□□□ -1
CBX5-202ENST00000439541 SLC43A1O75387 559 aa8.82□□□□□ -1
CBX5-202ENST00000439541 WNT11O96014 354 aa8.82□□□□□ -1
CBX5-202ENST00000439541 CD53P19397 219 aa8.82□□□□□ -1
CBX5-202ENST00000439541 TGM4P49221 684 aa8.82□□□□□ -1
CBX5-202ENST00000439541 EVX1P49640 407 aa8.82□□□□□ -1
CBX5-202ENST00000439541 FOXF2Q12947 444 aa8.82□□□□□ -1
CBX5-202ENST00000439541 TRAM1Q15629 374 aa8.82□□□□□ -1
CBX5-202ENST00000439541 CNIH2Q6PI25 160 aa8.82□□□□□ -1
CBX5-202ENST00000439541 TIGD4Q8IY51 512 aa8.82□□□□□ -1
CBX5-202ENST00000439541 NAXEQ8NCW5 288 aa8.82□□□□□ -1
CBX5-202ENST00000439541 OR6N2Q8NGY6 317 aa8.82□□□□□ -1
CBX5-202ENST00000439541 TMEM45BQ96B21 275 aa8.82□□□□□ -1
CBX5-202ENST00000439541 INTS12Q96CB8 462 aaKnown RBP8.82□□□□□ -1
CBX5-202ENST00000439541 RBP7Q96R05 134 aa8.82□□□□□ -1
CBX5-202ENST00000439541 ATF6BQ99941 703 aa8.82□□□□□ -1
CBX5-202ENST00000439541 TMEM246Q9BRR3 403 aa8.82□□□□□ -1
CBX5-202ENST00000439541 EMC7Q9NPA0 242 aa8.82□□□□□ -1
CBX5-202ENST00000439541 ING3Q9NXR8 418 aa8.82□□□□□ -1
CBX5-202ENST00000439541 COMMD3Q9UBI1 195 aa8.82□□□□□ -1
CBX5-202ENST00000439541 PRSS50Q9UI38 385 aa8.82□□□□□ -1
CBX5-202ENST00000439541 RELNP78509 3460 aa8.82□□□□□ -1
CBX5-202ENST00000439541 FAM240BA0A1B0GVZ2 78 aa8.82□□□□□ -1
CBX5-202ENST00000439541 ZNF724A8MTY0 619 aa8.82□□□□□ -1
CBX5-202ENST00000439541 GPR171O14626 319 aa8.82□□□□□ -1
CBX5-202ENST00000439541 PLA2G10O15496 165 aa8.82□□□□□ -1
CBX5-202ENST00000439541 LYRM1O43325 122 aa8.82□□□□□ -1
CBX5-202ENST00000439541 SS18L1O75177 396 aaPredicted RBP8.82□□□□□ -1
CBX5-202ENST00000439541 MRPL33O75394 65 aaKnown RBP8.82□□□□□ -1
CBX5-202ENST00000439541 KHDRBS3O75525 346 aaKnown RBP8.82□□□□□ -1
CBX5-202ENST00000439541 TOXO94900 526 aa8.82□□□□□ -1
CBX5-202ENST00000439541 CRABP1P29762 137 aa8.82□□□□□ -1
CBX5-202ENST00000439541 KIR2DL3P43628 341 aa8.82□□□□□ -1
CBX5-202ENST00000439541 MTNR1BP49286 362 aa8.82□□□□□ -1
CBX5-202ENST00000439541 FOXG1P55316 489 aaPredicted RBP8.82□□□□□ -1
CBX5-202ENST00000439541 IL18Q14116 193 aa8.82□□□□□ -1
CBX5-202ENST00000439541 THEM4Q5T1C6 240 aa8.82□□□□□ -1
CBX5-202ENST00000439541 C1orf185Q5T7R7 199 aa8.82□□□□□ -1
CBX5-202ENST00000439541 C9orf135Q5VTT2 229 aa8.82□□□□□ -1
CBX5-202ENST00000439541 NSUN5P2Q63ZY6 315 aa8.82□□□□□ -1
CBX5-202ENST00000439541 VWA1Q6PCB0 445 aa8.82□□□□□ -1
CBX5-202ENST00000439541 DNM1P34Q6PK57 102 aa8.82□□□□□ -1
CBX5-202ENST00000439541 SLC25A47Q6Q0C1 308 aa8.82□□□□□ -1
CBX5-202ENST00000439541 LHFPL3Q86UP9 236 aa8.82□□□□□ -1
CBX5-202ENST00000439541 LINC00346Q8IVM7 164 aa8.82□□□□□ -1
CBX5-202ENST00000439541 SLC35F2Q8IXU6 374 aa8.82□□□□□ -1
CBX5-202ENST00000439541 CNEP1R1Q8N9A8 125 aa8.82□□□□□ -1
CBX5-202ENST00000439541 SLC26A10Q8NG04 563 aa8.82□□□□□ -1
CBX5-202ENST00000439541 CPT1CQ8TCG5 803 aa8.82□□□□□ -1
CBX5-202ENST00000439541 UBASH3BQ8TF42 649 aa8.82□□□□□ -1
CBX5-202ENST00000439541 KCTD12Q96CX2 325 aaKnown RBP8.82□□□□□ -1
CBX5-202ENST00000439541 AMELYQ99218 206 aa8.82□□□□□ -1
CBX5-202ENST00000439541 ZNF649Q9BS31 505 aa8.82□□□□□ -1
CBX5-202ENST00000439541 SLCO5A1Q9H2Y9 848 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms