RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 UBBP0CG47 229 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 UBCP0CG48 685 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 RCC1P18754 421 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 CD1CP29017 333 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 CDKN2AP42771 156 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 TSFMP43897 325 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 RPS11P62280 158 aaKnown RBP eCLIP8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 DHRS2Q13268 280 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 C21orf62-AS1Q17RA5 79 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 MOGAT2Q3SYC2 334 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 AVPI1Q5T686 147 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 OVCH2Q7RTZ1 564 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 ZNF101Q8IZC7 436 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 C17orf78Q8N4C9 275 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 TMEM104Q8NE00 496 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 PNPLA2Q96AD5 504 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 CNTNAP3BQ96NU0 1288 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 ELOVL3Q9HB03 270 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 ISYNA1Q9NPH2 558 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 MED17Q9NVC6 651 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 PTTG3PQ9NZH4 202 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 GHRLQ9UBU3 117 aa8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 TMEM184BQ9Y519 407 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-202ENST00000439374 KIF26AQ9ULI4 1882 aaPredicted RBP8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 WDFY4Q6ZS81 3184 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 ANKRD20A5PA0PJZ0 165 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 C1orf196B1AJZ1 125 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 LMX1BO60663 402 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 SLC16A7O60669 478 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 APOC1P02654 83 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 ITGA5P08648 1049 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 CALCBP10092 127 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 GPR143P51810 404 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 B2MP61769 119 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 PPP1R1AQ13522 171 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 RPL22L1Q6P5R6 122 aaKnown RBP8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 BAIAP2L2Q6UXY1 529 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 COX15Q7KZN9 410 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 ZNF584Q8IVC4 421 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 CCDC36Q8IYA8 594 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 DND1Q8IYX4 353 aaKnown RBP8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 RNF113BQ8IZP6 322 aaKnown RBP8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 GABRG1Q8N1C3 465 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 NT5CQ8TCD5 201 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 FGF11Q92914 225 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 FAM3DQ96BQ1 224 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 SLC25A44Q96H78 314 aaPredicted RBP8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 CLCC1Q96S66 551 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 G6PC3Q9BUM1 346 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 EIF5A2Q9GZV4 153 aaKnown RBP8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 SEMA6CQ9H3T2 930 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 CTSFQ9UBX1 484 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 ENTPD2Q9Y5L3 495 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 WDFY3Q8IZQ1 3526 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 FANCMQ8IYD8 2048 aa8.96□□□□□ -0.97
CDC42SE1-202ENST00000439374 NME2P1O60361 137 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 NXPH3O95157 252 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 MPZL1O95297 269 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 HPP00738 406 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 SLC2A5P22732 501 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 DPP4P27487 766 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 SDHAP31040 664 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 ACTC1P68032 377 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 ACTA1P68133 377 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 PLCXD2Q0VAA5 305 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 SKP2Q13309 424 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 NR0B2Q15466 257 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 RNASE10Q5GAN6 216 aaKnown RBP8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 CARD17Q5XLA6 110 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 SLC35F3Q8IY50 421 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 PRO1933Q9H354 126 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 SEC61A2Q9H9S3 476 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 LYRM4Q9HD34 91 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 MRPL22Q9NWU5 206 aaKnown RBP8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 PURGQ9UJV8 347 aaKnown RBP8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 MMP24Q9Y5R2 645 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 KIAA1671Q9BY89 1806 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 KIR2DS5A0A0G2JLQ3 304 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 A0A0G2JNG1 304 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 SPTY2D1-AS1A0A0U1RR47 76 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 A0A1W2PPE3 182 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 KIR2DS3K7RE56 304 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 RNF224P0DH78 156 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 ACAA2P42765 397 aaKnown RBP8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 PPIAP62937 165 aaKnown RBP8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 KIR2DS5Q14953 304 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 TOMM20Q15388 145 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 PRAMEF8Q5VWM4 474 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 PRAMEF7Q5VXH5 474 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 MISPQ8IVT2 679 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 LINC00469Q8N7U9 141 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 TCEAL3Q969E4 200 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 WBP1Q96G27 269 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 GABRG3Q99928 467 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 TAS2R4Q9NYW5 299 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 FRRS1LQ9P0K9 344 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 ZNF223Q9UK11 482 aaPredicted RBP8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 AMDHD2Q9Y303 409 aa8.96□□□□□ -0.98
CDC42SE1-202ENST00000439374 CNOT1A5YKK6 2376 aaKnown RBP8.95□□□□□ -0.98
CDC42SE1-202ENST00000439374 PHF3Q92576 2039 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms