RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 TBC1D3IA0A087WXS9 549 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 POM121BA6NF01 834 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 TBC1D3LB9A6J9 549 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 FOXS1O43638 330 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 FABP1P07148 127 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 ERCC1P07992 297 aaPredicted RBP12.18□□□□□ -0.46
PCNX3-202ENST00000439247 TBC1D3HP0C7X1 549 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 MUC1P15941 1255 aaPredicted RBP12.18□□□□□ -0.46
PCNX3-202ENST00000439247 KIR2DL1P43626 348 aaPredicted RBP12.18□□□□□ -0.46
PCNX3-202ENST00000439247 EGR4Q05215 589 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 SMAD4Q13485 552 aaKnown RBP12.18□□□□□ -0.46
PCNX3-202ENST00000439247 ELAVL1Q15717 326 aaKnown RBP12.18□□□□□ -0.46
PCNX3-202ENST00000439247 CST6Q15828 149 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 TMEM225Q6GV28 225 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 TBC1D3CQ6IPX1 549 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 PAPD4Q6PIY7 484 aaKnown RBP12.18□□□□□ -0.46
PCNX3-202ENST00000439247 LYG2Q86SG7 212 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 MARCH3Q86UD3 253 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 TBC1D3Q8IZP1 549 aaPredicted RBP12.18□□□□□ -0.46
PCNX3-202ENST00000439247 LRRC75AQ8NAA5 344 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 TSACCQ96A04 125 aaPredicted RBP12.18□□□□□ -0.46
PCNX3-202ENST00000439247 FN3KRPQ9HA64 309 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 GSN-AS1Q9NRJ2 163 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.18□□□□□ -0.46
PCNX3-202ENST00000439247 EPHA6Q9UF33 1036 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 PRR19A6NJB7 356 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 C9JQL5 133 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 H0YIZ8 118 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 HTR2CP28335 458 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 SDHAP31040 664 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 CD96P40200 585 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 CD226Q15762 336 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 ZNF74Q16587 644 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 C1QL3Q5VWW1 255 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 ZSCAN4Q8NAM6 433 aaPredicted RBP12.18□□□□□ -0.46
PCNX3-202ENST00000439247 ARL11Q969Q4 196 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 GON4LQ3T8J9 2241 aa12.18□□□□□ -0.46
PCNX3-202ENST00000439247 A0A1W2PQU0 124 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 SHISA7A6NL88 538 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 APBB3O95704 486 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 RD3LP0DJH9 198 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 CD79AP11912 226 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 SERPINF1P36955 418 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 PRPS1P60891 318 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 ADAM8P78325 824 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 AIMP2Q13155 320 aaKnown RBP12.17□□□□□ -0.46
PCNX3-202ENST00000439247 SGCGQ13326 291 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 GPR18Q14330 331 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 ELOCQ15369 112 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 FAM166AQ6J272 317 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 ABHD13Q7L211 337 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 ZNF550Q7Z398 422 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 CA13Q8N1Q1 262 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 OR4K17Q8NGC6 315 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 OR9A4Q8NGU2 314 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 OR14C36Q8NHC7 312 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 RAB7BQ96AH8 199 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 INTS14Q96SY0 518 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 EDEM2Q9BV94 578 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 KIR3DX1Q9H7L2 352 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 CYTL1Q9NRR1 136 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 SLC17A4Q9Y2C5 497 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 CARHSP1Q9Y2V2 147 aaKnown RBP12.17□□□□□ -0.46
PCNX3-202ENST00000439247 SNAPINO95295 136 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 AK1P00568 194 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 ABOP16442 354 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 RORAP35398 523 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 PPT1P50897 306 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 C10orf91Q5T1B1 145 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 FJX1Q86VR8 437 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 CSNK1A1LQ8N752 337 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 HLA-CQ95604 372 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 FOXRED1Q96CU9 486 aaPredicted RBP12.17□□□□□ -0.46
PCNX3-202ENST00000439247 RNF126Q9BV68 326 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 CHMP1AQ9HD42 196 aaPredicted RBP12.17□□□□□ -0.46
PCNX3-202ENST00000439247 NIT2Q9NQR4 276 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 COLEC10Q9Y6Z7 277 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 LOC101059948A0A1B0GTJ6 334 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 COLCA2A8K830 154 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 CD74P04233 296 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 SPARCP09486 303 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 FAM157CP0CG43 387 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 PI3P19957 117 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 TMPRSS9Q7Z410 1059 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 ZNF584Q8IVC4 421 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 BAP18Q8IXM2 172 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 PHOSPHO1Q8TCT1 267 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 PHF7Q9BWX1 381 aaPredicted RBP12.17□□□□□ -0.46
PCNX3-202ENST00000439247 LAT2Q9GZY6 243 aa12.17□□□□□ -0.46
PCNX3-202ENST00000439247 SERINC4A6NH21 518 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 ADAP1O75689 374 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 MPZL1O95297 269 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 MELTFP08582 738 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 CD1CP29017 333 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 HRH1P35367 487 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 SLC25A1P53007 311 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 SRSF4Q08170 494 aaKnown RBP12.16□□□□□ -0.46
PCNX3-202ENST00000439247 SLC25A42Q86VD7 318 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 CHST4Q8NCG5 386 aa12.16□□□□□ -0.46
PCNX3-202ENST00000439247 DMBX1Q8NFW5 382 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms