RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ACBD6Q9BR61 282 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 SLC35A5Q9BS91 424 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 NAT9Q9BTE0 207 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 ZSCAN5AQ9BUG6 496 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 ASB8Q9H765 288 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 SMYD3Q9H7B4 428 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 LHX9Q9NQ69 397 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 FBXO8Q9NRD0 319 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 TBK1Q9UHD2 729 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 BTNL2Q9UIR0 455 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 GGA2Q9UJY4 613 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 STAP1Q9ULZ2 295 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 TRAF3IP3Q9Y228 551 aa2.22□□□□□ -2.05
HMGB3P12-201ENST00000438745 SONP18583 2426 aaKnown RBP2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 HELTA6NFD8 242 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 CCDC169A6NNP5 214 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 TRDCB7Z8K6 153 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 ARPC3O15145 178 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 PIN1P1O15428 100 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 MAGEB3O15480 346 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 TAPBPO15533 448 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 CD5LO43866 347 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 ATP5LO75964 103 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 ABOP16442 354 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 IMPDH1P20839 514 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 PTMSP20962 102 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 HLCSP50747 726 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 TDGF1P3P51864 188 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 SELENOTP62341 195 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 TGFBR3Q03167 851 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 CKAP4Q07065 602 aaKnown RBP2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 PSG7Q13046 419 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 ARFRP1Q13795 201 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 ARL6IP1Q15041 203 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 CCDC14Q49A88 953 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 DMRTC1Q5HYR2 192 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 C9orf64Q5T6V5 341 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 GPRC6AQ5T6X5 926 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 PMF1Q6P1K2 205 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 RAB43Q86YS6 212 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 VSTM4Q8IW00 320 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 LRRC75A-AS1Q8N1F1 130 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 OR2L13Q8N349 312 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 FTMTQ8N4E7 242 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 CATSPER1Q8NEC5 780 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 CHCHD10Q8WYQ3 142 aaPredicted RBP2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 NIPSNAP3BQ9BS92 247 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 SLC17A9Q9BYT1 436 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 UCK2Q9BZX2 261 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 POLR1EQ9GZS1 481 aaKnown RBP2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 AIG1Q9NVV5 245 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 DCDC2Q9UHG0 476 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 NEU3Q9UQ49 428 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 FARSAQ9Y285 508 aaKnown RBP2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 TIMM10BQ9Y5J6 103 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 V9GY05 133 aa2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 PRRC2CQ9Y520 2896 aaKnown RBP2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 EPPK1P58107 5090 aaKnown RBP2.21□□□□□ -2.06
HMGB3P12-201ENST00000438745 IGKV1D-8A0A087WSZ0 117 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 A0A0D9SFI3 127 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 A6NIZ1 184 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 C10orf142B7Z368 130 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 DCTN6O00399 190 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 KPNA3O00505 521 aaPredicted RBP2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 POLR2DO15514 142 aaKnown RBP2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 TCF21O43680 179 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 ZNF861PO60384 105 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 PFKFB2O60825 505 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 ZNF780AO75290 641 aaPredicted RBP2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 DIRAS1O95057 198 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 SNAPINO95295 136 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 STAMBPO95630 424 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 LGI1O95970 557 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 TNFP01375 233 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 P04436 131 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 UQCRHP07919 91 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 CLTAP09496 248 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 NCK1P16333 377 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 COX7A1P24310 79 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 CD1CP29017 333 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 GNA11P29992 359 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 OTX2P32243 289 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 SHMT2P34897 504 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 CA5AP35218 305 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 PRPHP41219 470 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 CSKP41240 450 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 KLK7P49862 253 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 ZNF133P52736 654 aaPredicted RBP2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 PKNOX1P55347 436 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 PRPS1P60891 318 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 RAP1BP61224 184 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 RPS21P63220 83 aaKnown RBP2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 NSDHLQ15738 373 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 ANKDD1AQ495B1 522 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 BCL7AQ4VC05 210 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 TPRG1LQ5T0D9 272 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 C1orf146Q5VVC0 180 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 SPECC1LQ69YQ0 1117 aa2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 ZNF571Q7Z3V5 609 aaPredicted RBP2.2□□□□□ -2.06
HMGB3P12-201ENST00000438745 CCDC50Q8IVM0 306 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms