RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 VASH1Q7L8A9 365 aaPredicted RBP16■□□□□ 0.15
HDAC6-208ENST00000438518 ACBD7Q8N6N7 88 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 BPIFB6Q8NFQ5 453 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 RNF133Q8WVZ7 376 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 LGALS12Q96DT0 336 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 SLAMF6Q96DU3 332 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 MAP6Q96JE9 813 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 RADILQ96JH8 1075 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 PSMG3-AS1Q96PY0 264 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 DCLRE1CQ96SD1 692 aaKnown RBP16■□□□□ 0.15
HDAC6-208ENST00000438518 YTHDF1Q9BYJ9 559 aaKnown RBP16■□□□□ 0.15
HDAC6-208ENST00000438518 AMBNQ9NP70 447 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 PSORS1C1Q9UIG5 152 aa16■□□□□ 0.15
HDAC6-208ENST00000438518 USP9XQ93008 2570 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-208ENST00000438518 IGHV1-18A0A0C4DH31 117 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 M0R1B8 84 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 ZNF254O75437 659 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 IGHA1P01876 353 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 APOC1P02654 83 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 STOMP27105 288 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 RPS27P42677 84 aaKnown RBP15.99■□□□□ 0.15
HDAC6-208ENST00000438518 ZNF83P51522 516 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 GRB2P62993 217 aaKnown RBP15.99■□□□□ 0.15
HDAC6-208ENST00000438518 ROM1Q03395 351 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 RAB39AQ14964 217 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 UNQ6126/PRO20091Q6UXV3 157 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 ZNF584Q8IVC4 421 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 C1orf174Q8IYL3 243 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 SLC30A7Q8NEW0 376 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 OR4F15Q8NGB8 312 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 OR1F12Q8NHA8 337 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 AKR7LQ8NHP1 331 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 THEM6Q8WUY1 208 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 KCNS3Q9BQ31 491 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 MROQ9BYG7 248 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 NIPAL2Q9H841 368 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 PNRC2Q9NPJ4 139 aaKnown RBP15.99■□□□□ 0.15
HDAC6-208ENST00000438518 NPAP1Q9NZP6 1156 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 LRCH1Q9Y2L9 728 aa15.99■□□□□ 0.15
HDAC6-208ENST00000438518 ADGRG4Q8IZF6 3080 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 A1L4Q6 167 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 J3QW42 95 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 CRYAAP02489 173 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 CECR9P0C854 216 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 PSKH1P11801 424 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 COX6B1P14854 86 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 CD40P25942 277 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 DCTDP32321 178 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 HTR5AP47898 357 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 GDI2P50395 445 aaKnown RBP15.98■□□□□ 0.15
HDAC6-208ENST00000438518 ACTA2P62736 377 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 ACTG2P63267 376 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 NCMAPQ5T1S8 102 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 OTPQ5XKR4 325 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 TENM4Q6N022 2769 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 ZNF774Q6NX45 483 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 ARL9Q6T311 187 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 ZNF679Q8IYX0 411 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 ZNF540Q8NDQ6 660 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 CPEB3Q8NE35 698 aaKnown RBP15.98■□□□□ 0.15
HDAC6-208ENST00000438518 OR10H4Q8NGA5 316 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 OR52I1Q8NGK6 324 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 MYDGFQ969H8 173 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 SPTSSAQ969W0 71 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 TMEM80Q96HE8 168 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 FKBP14Q9NWM8 211 aa15.98■□□□□ 0.15
HDAC6-208ENST00000438518 DIMT1Q9UNQ2 313 aaKnown RBP15.98■□□□□ 0.15
HDAC6-208ENST00000438518 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-208ENST00000438518 DAPL1A0PJW8 107 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 ICMTO60725 284 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 SULT1C4O75897 302 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 MYL12AP19105 171 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 NAAAQ02083 359 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 SNTB1Q13884 538 aaKnown RBP15.97■□□□□ 0.15
HDAC6-208ENST00000438518 TAF13Q15543 124 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 SP5Q6BEB4 398 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-208ENST00000438518 ZNF322Q6U7Q0 402 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-208ENST00000438518 PLEKHG7Q6ZR37 379 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 KCTD20Q7Z5Y7 419 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 KRT77Q7Z794 578 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 ZNF786Q8N393 782 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 STX19Q8N4C7 294 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 HAVCR2Q8TDQ0 301 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 GGHQ92820 318 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 POM121L2Q96KW2 1035 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 OR8B4Q96RC9 309 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 KCNJ15Q99712 375 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 COPS4Q9BT78 406 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 CDH20Q9HBT6 801 aa15.97■□□□□ 0.15
HDAC6-208ENST00000438518 CHCHD3Q9NX63 227 aaKnown RBP15.97■□□□□ 0.15
HDAC6-208ENST00000438518 EXOSC1Q9Y3B2 195 aaKnown RBP15.97■□□□□ 0.15
HDAC6-208ENST00000438518 SPTBN1Q01082 2364 aaKnown RBP15.97■□□□□ 0.15
HDAC6-208ENST00000438518 A0A1W2PQL4 384 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-208ENST00000438518 XPNPEP2O43895 674 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 MRPS14O60783 128 aaKnown RBP15.96■□□□□ 0.15
HDAC6-208ENST00000438518 H2BFMP0C1H6 154 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 CRHBPP24387 322 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 APEX1P27695 318 aaKnown RBP15.96■□□□□ 0.15
HDAC6-208ENST00000438518 HSD11B1P28845 292 aa15.96■□□□□ 0.15
HDAC6-208ENST00000438518 PCSK6P29122 969 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms