RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 NKAIN2Q5VXU1 208 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 MRGPREQ86SM8 312 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 NPEPL1Q8NDH3 523 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 HGDQ93099 445 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 SULT4A1Q9BR01 284 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 TINAGL1Q9GZM7 467 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-205ENST00000438362 SLC17A5Q9NRA2 495 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 LUZP4Q9P127 313 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF629Q9UEG4 869 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-205ENST00000438362 ST6GALNAC2Q9UJ37 374 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 CSAG2Q9Y5P2 127 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 WDR90Q96KV7 1748 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 HMSDA8MTL9 139 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 SNRNP70P08621 437 aaKnown RBP6.05□□□□□ -1.44
CSDE1-205ENST00000438362 CPT2P23786 658 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 SERPINF1P36955 418 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 SNU13P55769 128 aaKnown RBP6.05□□□□□ -1.44
CSDE1-205ENST00000438362 SNRPNP63162 240 aaKnown RBP6.05□□□□□ -1.44
CSDE1-205ENST00000438362 HSF1Q00613 529 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 PLP2Q04941 152 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 LYG2Q86SG7 212 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 COMTD1Q86VU5 262 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 OR1J2Q8NGS2 313 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 TMED6Q8WW62 240 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 SLAMF6Q96DU3 332 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 BANF2Q9H503 90 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 FAM212BQ9NTI7 297 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-205ENST00000438362 SUSD2Q9UGT4 822 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 MRM2Q9UI43 246 aaKnown RBP6.05□□□□□ -1.44
CSDE1-205ENST00000438362 METRNQ9UJH8 293 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 TMEM229AB2RXF0 380 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 SEMA7AO75326 666 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 PTP4A3O75365 173 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 BPNT1O95861 308 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 FCGR2AP12318 317 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF16P17020 682 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-205ENST00000438362 ALOX5APP20292 161 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 PEBP1P30086 187 aaKnown RBP6.05□□□□□ -1.44
CSDE1-205ENST00000438362 CASRP41180 1078 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 CAPZBP47756 277 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 UBE2IP63279 158 aaKnown RBP6.05□□□□□ -1.44
CSDE1-205ENST00000438362 KCNAB1Q14722 419 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 MPPED2Q15777 294 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 PAN3Q58A45 887 aaKnown RBP6.05□□□□□ -1.44
CSDE1-205ENST00000438362 VWA2Q5GFL6 755 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 MEX3BQ6ZN04 569 aaKnown RBP6.05□□□□□ -1.44
CSDE1-205ENST00000438362 APOBEC4Q8WW27 367 aaKnown RBP6.05□□□□□ -1.44
CSDE1-205ENST00000438362 TCTEX1D2Q8WW35 142 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 MOGAT1Q96PD6 335 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 CMSS1Q9BQ75 279 aaKnown RBP6.05□□□□□ -1.44
CSDE1-205ENST00000438362 ULBP2Q9BZM5 246 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 MMP17Q9ULZ9 603 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 WIF1Q9Y5W5 379 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 CHD5Q8TDI0 1954 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 ZSWIM8A7E2V4 1837 aa6.05□□□□□ -1.44
CSDE1-205ENST00000438362 FRG2CA6NGY1 282 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 TBPP20226 339 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 HRH1P35367 487 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 APOBEC1P41238 236 aaKnown RBP6.04□□□□□ -1.44
CSDE1-205ENST00000438362 FLI1Q01543 452 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-205ENST00000438362 MFGE8Q08431 387 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-205ENST00000438362 CNN3Q15417 329 aaKnown RBP6.04□□□□□ -1.44
CSDE1-205ENST00000438362 PRTGQ2VWP7 1150 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 SFRP5Q5T4F7 317 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 C1orf53Q5VUE5 145 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 TRILQ7L0X0 811 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 BAP18Q8IXM2 172 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 GALNT16Q8N428 558 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 C10orf90Q96M02 699 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 CHST11Q9NPF2 352 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF223Q9UK11 482 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-205ENST00000438362 PCDHGA9Q9Y5G4 932 aaKnown RBP6.04□□□□□ -1.44
CSDE1-205ENST00000438362 A0A1B0GX78 115 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 SHISA3A0PJX4 238 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 GJE1A6NN92 205 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 BCL2L11O43521 198 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 EML2O95834 649 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 HOXC4P09017 264 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-205ENST00000438362 THBS2P35442 1172 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 PNLIPRP2P54317 469 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 MTCP1P56278 107 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 CLDN17P56750 224 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 ISXQ2M1V0 245 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 EXOSC6Q5RKV6 272 aaKnown RBP6.04□□□□□ -1.44
CSDE1-205ENST00000438362 AKR1C8PQ5T2L2 129 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 AVPI1Q5T686 147 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 C11orf87Q6NUJ2 197 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 TMEM200AQ86VY9 491 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF695Q8IW36 515 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 PRSS35Q8N3Z0 413 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 OR51E1Q8TCB6 317 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 RNF128Q8TEB7 428 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 TAAR8Q969N4 342 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF285Q96NJ3 590 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 SPACA5Q96QH8 159 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 METTL9Q9H1A3 318 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 TCEAL2Q9H3H9 227 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-205ENST00000438362 MED29Q9NX70 200 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 PIGBOS1A0A0B4J2F0 54 aa6.04□□□□□ -1.44
CSDE1-205ENST00000438362 CYR61O00622 381 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms