RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 MDC1Q14676 2089 aaKnown RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 KDM4FA0A1W2PPD8 638 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 SLC31A1O15431 190 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 LEFTY1O75610 366 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 TRAPPC6AO75865 159 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 POP4O95707 220 aaKnown RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 AIFM1O95831 613 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 SLC6A6P31641 620 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 FLT3LGP49771 235 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 NOGQ13253 232 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF343Q6P1L6 599 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 TMCO2Q7Z6W1 182 aaPredicted RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 LYG2Q86SG7 212 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 CPNE4Q96A23 557 aaPredicted RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 CMBLQ96DG6 245 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 SRMSQ9H3Y6 488 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 FRRS1LQ9P0K9 344 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 MRPS17Q9Y2R5 130 aaKnown RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 ETV7Q9Y603 341 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 C9orf170A2RU37 121 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 UMAD1C9J7I0 102 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 SOX1O00570 391 aaPredicted RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 CLDN4O14493 209 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 OR2C1O95371 312 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 HOXB5P09067 269 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 HOXA5P20719 270 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 RPL13AP40429 203 aaKnown RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 NFATC4Q14934 902 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 CYB5D2Q8WUJ1 264 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 WDR34Q96EX3 536 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 RNF126Q9BV68 326 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 CHST5Q9GZS9 411 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 KLHDC2Q9Y2U9 406 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 PLXNB3Q9ULL4 1909 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 A0A1W2PPC1 479 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 OR52A4PA6NMU1 304 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 K7EPK0 472 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 GPANK1O95872 356 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 SFTPCP11686 197 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 HIST1H1BP16401 226 aaKnown RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 HMGA1P17096 107 aaKnown RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 CDX1P47902 265 aaPredicted RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 FAM71E2Q8N5Q1 922 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 FAM46BQ96A09 425 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 TOX2Q96NM4 488 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 TAF9BQ9HBM6 251 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 KPTNQ9Y664 436 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 PPP1R2P9O14990 202 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 LILRB5O75023 590 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 FRKP42685 505 aaPredicted RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 ALDH3B1P43353 468 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 FHITP49789 147 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 SLC16A9Q7RTY1 509 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 SMIM15Q7Z3B0 74 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF584Q8IVC4 421 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 TCEAL2Q9H3H9 227 aaPredicted RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 C8orf33Q9H7E9 229 aaPredicted RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 SLC2A4RGQ9NR83 387 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 HEATR5AQ86XA9 2040 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 TEX13DA0A0J9YY54 714 aaPredicted RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 MFNGO00587 321 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 C1QL1O75973 258 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 SFTPBP07988 381 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 LSM6P62312 80 aaKnown RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 ELOCQ15369 112 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 MOGAT2Q3SYC2 334 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF385CQ66K41 422 aaPredicted RBP6.75□□□□□ -1.33
CPSF6-202ENST00000435070 SLC43A2Q8N370 569 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 JAGN1Q8N5M9 183 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 ACOT4Q8N9L9 421 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 TSTD1Q8NFU3 115 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 TIFAQ96CG3 184 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 C1orf198Q9H425 327 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 TIMM10BQ9Y5J6 103 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 WIF1Q9Y5W5 379 aa6.75□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF106Q9H2Y7 1883 aaKnown RBP6.74□□□□□ -1.33
CPSF6-202ENST00000435070 B3GALT2O43825 422 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 IL33O95760 270 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 BIDP55957 195 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 RAB11BQ15907 218 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 LCN10Q6JVE6 187 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 ARHGAP11AQ6P4F7 1023 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 OR56B1Q8NGI3 324 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 GPX8Q8TED1 209 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 LCN9Q8WX39 176 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 MTHFD2LQ9H903 347 aaPredicted RBP6.74□□□□□ -1.33
CPSF6-202ENST00000435070 FBRSQ9HAH7 460 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 GDF2Q9UK05 429 aaPredicted RBP6.74□□□□□ -1.33
CPSF6-202ENST00000435070 METTL12A8MUP2 240 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF705GA8MUZ8 300 aaPredicted RBP6.74□□□□□ -1.33
CPSF6-202ENST00000435070 C4orf51C9J302 202 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 LATO43561 262 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 SRPX2O60687 465 aaPredicted RBP6.74□□□□□ -1.33
CPSF6-202ENST00000435070 STK17BO94768 372 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 ZBTB25P24278 435 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 SLC11A1P49279 550 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 DVL1P1P54792 670 aaPredicted RBP6.74□□□□□ -1.33
CPSF6-202ENST00000435070 MFSD12Q6NUT3 480 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 LPCAT3Q6P1A2 487 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 TRAM1L1Q8N609 369 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms