RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 YIPF3Q9GZM5 350 aa13.33□□□□□ -0.28
CNOT9-205ENST00000433439 OR51B6Q9H340 312 aa13.33□□□□□ -0.28
CNOT9-205ENST00000433439 ESRP2Q9H6T0 727 aaKnown RBP13.33□□□□□ -0.28
CNOT9-205ENST00000433439 CDH20Q9HBT6 801 aa13.33□□□□□ -0.28
CNOT9-205ENST00000433439 SLC24A3Q9HC58 644 aa13.33□□□□□ -0.28
CNOT9-205ENST00000433439 CRNNQ9UBG3 495 aaPredicted RBP13.33□□□□□ -0.28
CNOT9-205ENST00000433439 COPS3Q9UNS2 423 aa13.33□□□□□ -0.28
CNOT9-205ENST00000433439 FLNCQ14315 2725 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 ZNF670-ZNF695F2Z2N8 137 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 ABCD4O14678 606 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 SIAH2O43255 324 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 IGLV1-44P01699 117 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 CD3EP07766 207 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 LYNP07948 512 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 PAX7P23759 505 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 PTAFRP25105 342 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 STOMP27105 288 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 HIST1H3AP68431 136 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 NAAAQ02083 359 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 PCK2Q16822 640 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 TBC1D28Q2M2D7 210 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 C6orf141Q5SZD1 244 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 NCMAPQ5T1S8 102 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 C1QTNF12Q5T7M4 302 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 HIST2H3PS2Q5TEC6 136 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 LAIR2Q6ISS4 152 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 SLC22A25Q6T423 547 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 HIST2H3AQ71DI3 136 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 ZNF786Q8N393 782 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 RFLNBQ8N5W9 214 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 ZNF454Q8N9F8 522 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 OR10S1Q8NGN2 331 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 RHNO1Q9BSD3 238 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 COPS4Q9BT78 406 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 HDHD2Q9H0R4 259 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 MOV10Q9HCE1 1003 aaKnown RBP13.32□□□□□ -0.28
CNOT9-205ENST00000433439 KCNN3Q9UGI6 736 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 IKZF2Q9UKS7 526 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 FBXL3Q9UKT7 428 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 PCDHGB5Q9Y5G0 923 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 PTPN13Q12923 2485 aa13.32□□□□□ -0.28
CNOT9-205ENST00000433439 C5orf49A4QMS7 147 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 DEFB108AA8MXU0 73 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 F5H5K5 113 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 SYNGR3O43761 229 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 CRYAAP02489 173 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 DBHP09172 617 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 H2BFMP0C1H6 154 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 ALOX5APP20292 161 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 CXCR4P61073 352 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 KLHL22Q53GT1 634 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 ADAM5Q6NVV9 412 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 LRRN1Q6UXK5 716 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 AHSA2Q719I0 299 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 KRT77Q7Z794 578 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.31□□□□□ -0.28
CNOT9-205ENST00000433439 FAM169BQ8N8A8 192 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 ACBD4Q8NC06 268 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 OR52I1Q8NGK6 324 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 OR1J2Q8NGS2 313 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 ST7LQ8TDW4 575 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 FBLIM1Q8WUP2 373 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 HS3ST6Q96QI5 342 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 ATF6BQ99941 703 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 PNRC2Q9NPJ4 139 aaKnown RBP13.31□□□□□ -0.28
CNOT9-205ENST00000433439 POU2F3Q9UKI9 436 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 MYRFQ9Y2G1 1151 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 GRIP1Q9Y3R0 1128 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 N6AMT1Q9Y5N5 214 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 TMEM14AQ9Y6G1 99 aa13.31□□□□□ -0.28
CNOT9-205ENST00000433439 LOC100509620A0A075B734 347 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 IGHV2OR16-5A0A0B4J2B6 119 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 A0A1W2PQL4 384 aaPredicted RBP13.3□□□□□ -0.28
CNOT9-205ENST00000433439 DAPL1A0PJW8 107 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 A6NNC1 897 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 ZNF878C9JN71 531 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 PTGES3LE9PB15 166 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 ATP6V1G2-DDX39BF2Z307 99 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 MAGEB4O15481 346 aaPredicted RBP13.3□□□□□ -0.28
CNOT9-205ENST00000433439 DENRO43583 198 aaKnown RBP13.3□□□□□ -0.28
CNOT9-205ENST00000433439 FADS2O95864 444 aaKnown RBP13.3□□□□□ -0.28
CNOT9-205ENST00000433439 PLAUP00749 431 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 OR2T7P0C7T2 308 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 CALCRP30988 508 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 PRKXP51817 358 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 NR1H2P55055 460 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 MED21Q13503 144 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 ZNF322Q6U7Q0 402 aaPredicted RBP13.3□□□□□ -0.28
CNOT9-205ENST00000433439 SSX6Q7RTT6 188 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 PAQR4Q8N4S7 273 aaPredicted RBP13.3□□□□□ -0.28
CNOT9-205ENST00000433439 ZNF540Q8NDQ6 660 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 OR2T27Q8NH04 317 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 GGHQ92820 318 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 COQ7Q99807 217 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 SCN3BQ9NY72 215 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 EXOGQ9Y2C4 368 aaKnown RBP13.3□□□□□ -0.28
CNOT9-205ENST00000433439 PCDHGB1Q9Y5G3 927 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 ATP23Q9Y6H3 246 aa13.3□□□□□ -0.28
CNOT9-205ENST00000433439 OR6C6A6NF89 314 aa13.29□□□□□ -0.28
CNOT9-205ENST00000433439 SLC1A7O00341 560 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms