RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 STRADAQ7RTN6 431 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 HDDC2Q7Z4H3 204 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 NRGNQ92686 78 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 MICU1Q9BPX6 476 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 TEKT3Q9BXF9 490 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 ZYG11BQ9C0D3 744 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 NXF3Q9H4D5 531 aaKnown RBP4.1□□□□□ -1.75
USP54-206ENST00000433394 UGT1A7Q9HAW7 530 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 UGT1A10Q9HAW8 530 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 UGT1A8Q9HAW9 530 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 MRPS30Q9NP92 439 aaKnown RBP4.1□□□□□ -1.75
USP54-206ENST00000433394 TRMT112Q9UI30 125 aaKnown RBP4.1□□□□□ -1.75
USP54-206ENST00000433394 CD84Q9UIB8 345 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 TBC1D24Q9ULP9 559 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 SLC17A4Q9Y2C5 497 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 EVC2Q86UK5 1308 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 PLEKHG2Q9H7P9 1386 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 YTHDC2Q9H6S0 1430 aaKnown RBP4.1□□□□□ -1.75
USP54-206ENST00000433394 CPS1P31327 1500 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 QRICH2Q9H0J4 1663 aa4.1□□□□□ -1.75
USP54-206ENST00000433394 PINLYPA6NC86 204 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 EIF4E2O60573 245 aaKnown RBP4.09□□□□□ -1.75
USP54-206ENST00000433394 DPM1O60762 260 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 CA11O75493 328 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 CTAG2O75638 210 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 NEFHP12036 1026 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 ZNF17P17021 662 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 RAB3BP20337 219 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 HRH1P35367 487 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 NAMPTP43490 491 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 CSNK1EP49674 416 aaKnown RBP4.09□□□□□ -1.75
USP54-206ENST00000433394 KCTD19Q17RG1 926 aaPredicted RBP4.09□□□□□ -1.75
USP54-206ENST00000433394 TMEM183BQ1AE95 376 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 C16orf87Q6PH81 154 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 ZNF493Q6ZR52 646 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 TMEM183AQ8IXX5 376 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 PRELID2Q8N945 189 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 MNS1Q8NEH6 495 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 OR4S2Q8NH73 311 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 PEX13Q92968 403 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 EEF1AKMT3Q96AZ1 226 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 MRPL37Q9BZE1 423 aaKnown RBP4.09□□□□□ -1.75
USP54-206ENST00000433394 ACTR3CQ9C0K3 210 aaPredicted RBP4.09□□□□□ -1.75
USP54-206ENST00000433394 RPRD1BQ9NQG5 326 aaKnown RBP4.09□□□□□ -1.75
USP54-206ENST00000433394 ABCB10Q9NRK6 738 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 MTCH1Q9NZJ7 389 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 NCOA3Q9Y6Q9 1424 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 ADGRB2O60241 1585 aa4.09□□□□□ -1.75
USP54-206ENST00000433394 NRXN3Q9Y4C0 1643 aa4.09□□□□□ -1.76
USP54-206ENST00000433394 BRD4O60885 1362 aaPredicted RBP4.08□□□□□ -1.76
USP54-206ENST00000433394 SUPT3HO75486 399 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 SRP72O76094 671 aaKnown RBP4.08□□□□□ -1.76
USP54-206ENST00000433394 FABP3P05413 133 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 CCNE1P24864 410 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 MNAT1P51948 309 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 KRTAP10-12P60413 245 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 REG3AQ06141 175 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 GINS1Q14691 196 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 PSG5Q15238 335 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 QPRTQ15274 297 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 OR7A5Q15622 319 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 ZSCAN26Q16670 478 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 STUMQ69YW2 141 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 CYB5R2Q6BCY4 276 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 TMEM220Q6QAJ8 160 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 MBOAT1Q6ZNC8 495 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 TEX43Q6ZNM6 134 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 MKXQ8IYA7 352 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 PRSS58Q8IYP2 241 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 OR9G4Q8NGQ1 327 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 CEMIPQ8WUJ3 1361 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 ITFG2Q969R8 447 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 CRLF2Q9HC73 371 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 ZC4H2Q9NQZ6 224 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 PDP1Q9P0J1 537 aaPredicted RBP4.08□□□□□ -1.76
USP54-206ENST00000433394 OR12D3Q9UGF7 316 aa4.08□□□□□ -1.76
USP54-206ENST00000433394 TP53BP1Q12888 1972 aaPredicted RBP4.07□□□□□ -1.76
USP54-206ENST00000433394 CHD2O14647 1828 aaKnown RBP4.07□□□□□ -1.76
USP54-206ENST00000433394 XRN1Q8IZH2 1706 aaKnown RBP4.07□□□□□ -1.76
USP54-206ENST00000433394 USP32Q8NFA0 1604 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 NKTRP30414 1462 aaKnown RBP4.07□□□□□ -1.76
USP54-206ENST00000433394 ADAMTS13Q76LX8 1427 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 IGLV11-55A0A075B6I3 123 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 KCNE1BA0A087WTH5 132 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 TRBV6-6A0A0A6YYG2 114 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 TRAV25A0A0B4J276 109 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 TRAF3IP2O43734 574 aaPredicted RBP4.07□□□□□ -1.76
USP54-206ENST00000433394 ICOSLGO75144 302 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 UTS2O95399 124 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 DNAH10OSP0CZ25 163 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 MGMTP16455 207 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 ZNF30P17039 623 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 RCC1P18754 421 aaPredicted RBP4.07□□□□□ -1.76
USP54-206ENST00000433394 TNFSF9P41273 254 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 CD151P48509 253 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 HERVK_113P61574 105 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 SLC7A9P82251 487 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 SP4Q02446 784 aa4.07□□□□□ -1.76
USP54-206ENST00000433394 SLC25A11Q02978 314 aaKnown RBP4.07□□□□□ -1.76
USP54-206ENST00000433394 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms