RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 KDM4BO94953 1096 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 SLC34A2O95436 690 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 TTRP02766 147 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 CD2P06729 351 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 H2BFMP0C1H6 154 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 ACSM4P0C7M7 580 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 TCEA1P23193 301 aaKnown RBP12.4□□□□□ -0.42
HOXC4-202ENST00000430889 MFAP5Q13361 173 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 CAMK2DQ13557 499 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 TMEM176BQ3YBM2 270 aaPredicted RBP12.4□□□□□ -0.42
HOXC4-202ENST00000430889 GLT8D1Q68CQ7 371 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 CFAP77Q6ZQR2 320 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 TMPPEQ6ZT21 453 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 HDDC2Q7Z4H3 204 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 FGD2Q7Z6J4 655 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 ELMOD2Q8IZ81 293 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 TMEM105Q8N8V8 129 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 PLPP7Q8NBV4 271 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 OR51A2Q8NGJ7 313 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 MS4A3Q96HJ5 214 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 SLC39A1Q9NY26 324 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 NPTNQ9Y639 398 aa12.4□□□□□ -0.42
HOXC4-202ENST00000430889 NCKAP5O14513 1909 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 WDR87Q6ZQQ6 2873 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 MEGF11A6BM72 1044 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 SMLR1H3BR10 107 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 ZIC3O60481 467 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 ALDOBP05062 364 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 GABRA1P14867 456 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 SSR4P51571 173 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 ZNF133P52736 654 aaPredicted RBP12.39□□□□□ -0.43
HOXC4-202ENST00000430889 CLRN1P58418 232 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 SLC35A1P78382 337 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 ZNF529Q6P280 563 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 LRFN4Q6PJG9 635 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 RHOUQ7L0Q8 258 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 OR6M1Q8NGM8 313 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 OR13C3Q8NGS6 347 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 C1orf198Q9H425 327 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 SMOC1Q9H4F8 434 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 CDCP1Q9H5V8 836 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 ZFP64Q9NPA5 681 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 PNRC2Q9NPJ4 139 aaKnown RBP12.39□□□□□ -0.43
HOXC4-202ENST00000430889 CKLFQ9UBR5 152 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 GDF2Q9UK05 429 aaPredicted RBP12.39□□□□□ -0.43
HOXC4-202ENST00000430889 MRPS18BQ9Y676 258 aaKnown RBP12.39□□□□□ -0.43
HOXC4-202ENST00000430889 FRYLO94915 3013 aa12.39□□□□□ -0.43
HOXC4-202ENST00000430889 NCOA6Q14686 2063 aaPredicted RBP12.39□□□□□ -0.43
HOXC4-202ENST00000430889 A0A1B0GUH1 482 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 DOK2O60496 412 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 PRAF2O60831 178 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 TGM6O95932 706 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 IGHEP01854 428 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 HPXP02790 462 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 CXCL3P19876 107 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 SDHBP21912 280 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 SFTPDP35247 375 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 FOLR3P41439 243 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 DSCR4P56555 118 aaPredicted RBP12.38□□□□□ -0.43
HOXC4-202ENST00000430889 CHAF1BQ13112 559 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 SFRP4Q6FHJ7 346 aaPredicted RBP12.38□□□□□ -0.43
HOXC4-202ENST00000430889 PPP1R32Q7Z5V6 425 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 SLC7A5P1Q8MH63 180 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 ZBTB44Q8NCP5 570 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 OR10H5Q8NGA6 315 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 CDV3Q9UKY7 258 aaKnown RBP12.38□□□□□ -0.43
HOXC4-202ENST00000430889 FLVCR2Q9UPI3 526 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 CFAP54Q96N23 3096 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 MEIKINA0A087WXM9 373 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 NSG1A0A0A6YYJ2 146 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 A0A1B0GTI1 187 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 SULT2B1O00204 365 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 P2RY10O00398 339 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 NDUFB6O95139 128 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 ZNF17P17021 662 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 HTR2CP28335 458 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 ZP1P60852 638 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 PSMA6P60900 246 aaKnown RBP12.38□□□□□ -0.43
HOXC4-202ENST00000430889 SSBP1Q04837 148 aaKnown RBP12.38□□□□□ -0.43
HOXC4-202ENST00000430889 POU4F3Q15319 338 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 LINC00303Q3SY05 128 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 FOXL2NBQ6ZUU3 175 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 RPS19BP1Q86WX3 136 aaKnown RBP12.38□□□□□ -0.43
HOXC4-202ENST00000430889 NKAIN3Q8N8D7 197 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 DTWD2Q8NBA8 298 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 GPX8Q8TED1 209 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 PTX4Q96A99 478 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 TMEM41AQ96HV5 264 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 NKX3-1Q99801 234 aaPredicted RBP12.38□□□□□ -0.43
HOXC4-202ENST00000430889 GON7Q9BXV9 100 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 PBOV1Q9GZY1 135 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 ZNF160Q9HCG1 818 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 DIABLOQ9NR28 239 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 CENPMQ9NSP4 180 aa12.38□□□□□ -0.43
HOXC4-202ENST00000430889 WDFY3Q8IZQ1 3526 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 A0A1W2PPL8 197 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 EIF1AYO14602 144 aaKnown RBP12.37□□□□□ -0.43
HOXC4-202ENST00000430889 FABP7O15540 132 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 ICMTO60725 284 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 ANXA3P12429 323 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms