RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ANKRD13BQ86YJ7 626 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 C11orf40Q8WZ69 217 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 SLC26A1Q9H2B4 701 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 ANKRD33BA6NCL7 494 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 IFNA4P05014 189 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 SELEP16581 610 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 LAP3P28838 519 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 CCBE1Q6UXH8 406 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-207ENST00000429896 GTPBP8Q8N3Z3 284 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-207ENST00000429896 OR5D18Q8NGL1 313 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 PRSS37A4D1T9 235 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 CRYAAP02489 173 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 HIST1H1CP16403 213 aaKnown RBP11.62□□□□□ -0.55
PTCH1-207ENST00000429896 NBL1P41271 181 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 RRAS2P62070 204 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-207ENST00000429896 OR8B8Q15620 311 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 C2orf76Q3KRA6 126 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 PPP1R32Q7Z5V6 425 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 LACC1Q8IV20 430 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 CMTM1Q8IZ96 169 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 TMEM185AQ8NFB2 350 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 DMBX1Q8NFW5 382 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 PPP1R35Q8TAP8 253 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 RND1Q92730 232 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 CACNG6Q9BXT2 260 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 NUPL2O15504 423 aaKnown RBP11.62□□□□□ -0.55
PTCH1-207ENST00000429896 ALDH3B2P48448 385 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 RPL22L1Q6P5R6 122 aaKnown RBP11.62□□□□□ -0.55
PTCH1-207ENST00000429896 CBLN3Q6UW01 205 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 GCNT2Q8N0V5 402 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 NOXO1Q8NFA2 376 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 ABHD4Q8TB40 342 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 GGHQ92820 318 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 GABARAPL1Q9H0R8 117 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 BABAM2Q9NXR7 383 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 RAXQ9Y2V3 346 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 ARRDC5A6NEK1 342 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 SLC22A5O76082 557 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 GABRA5P31644 462 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 IDH3GP51553 393 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-207ENST00000429896 CD226Q15762 336 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 KRTCAP3Q53RY4 240 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 ASCC1Q8N9N2 400 aaKnown RBP11.62□□□□□ -0.55
PTCH1-207ENST00000429896 C22orf15Q8WYQ4 148 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 POM121CA8CG34 1229 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 TFP02787 698 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 NHLH1Q02575 133 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 POU4F3Q15319 338 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 CDONQ4KMG0 1287 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 ZNF684Q5T5D7 378 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 CST9LP1Q5W188 147 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 STEAP3Q658P3 488 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 SGPP2Q8IWX5 399 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 ZG16BQ96DA0 208 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 OPA3Q9H6K4 179 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 CRLF2Q9HC73 371 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 ATPIF1Q9UII2 106 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 NLRC5Q86WI3 1866 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 NYNRINQ9P2P1 1898 aaKnown RBP11.62□□□□□ -0.55
PTCH1-207ENST00000429896 IMPA2O14732 288 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 EFSO43281 561 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 OMGP23515 440 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 SLC9A3R2Q15599 337 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 ZNF529Q6P280 563 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 CCDC71LQ8N9Z2 235 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 SCCPDHQ8NBX0 429 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 A4GNTQ9UNA3 340 aa11.62□□□□□ -0.55
PTCH1-207ENST00000429896 SURF4O15260 269 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 SELENOFO60613 162 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 AGAP6Q5VW22 663 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 CNIH2Q6PI25 160 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 PAQR6Q6TCH4 344 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 TRILQ7L0X0 811 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 MUL1Q969V5 352 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 OR51E2Q9H255 320 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 OR2M5A3KFT3 312 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 CDX4O14627 284 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-207ENST00000429896 ARPC1BO15143 372 aaKnown RBP11.61□□□□□ -0.55
PTCH1-207ENST00000429896 DHHO43323 396 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 HES1Q14469 280 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 OR2M3Q8NG83 312 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 MIB2Q96AX9 1013 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 BOD1Q96IK1 185 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 SYT3Q9BQG1 590 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 SLCO5A1Q9H2Y9 848 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 FBXL2Q9UKC9 423 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 CALCBP10092 127 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 SSTR2P30874 369 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 ZXDCQ2QGD7 858 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-207ENST00000429896 OR14K1Q8NGZ2 314 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 SLCO4A1Q96BD0 722 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 MEPEQ9NQ76 525 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-207ENST00000429896 C9orf172C9J069 976 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 F5H5P2 479 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 SCAF4O95104 1147 aaKnown RBP11.61□□□□□ -0.55
PTCH1-207ENST00000429896 RAB3DO95716 219 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 ST7LQ8TDW4 575 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 HRASLSQ9HDD0 168 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 CMC2Q9NRP2 79 aa11.61□□□□□ -0.55
PTCH1-207ENST00000429896 GMDSO60547 372 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms