RNA–Protein interactions for RNA: ENST00000429035.1

SDC1-204, Transcript of syndecan 1, humanhuman

TSL 3

Gene SDC1, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-204ENST00000429035 FFAR1O14842 300 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 SURF4O15260 269 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 WIPF1O43516 503 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 SLC16A7O60669 478 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 ICMTO60725 284 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 SERPINA1P01009 418 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 FSHBP01225 129 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 COX5BP10606 129 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 EGR1P18146 543 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 SLC7A2P52569 658 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 LIPEQ05469 1076 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 ZNF154Q13106 437 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 CDK5R2Q13319 367 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 AQP6Q13520 282 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 ZMYND11Q15326 602 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 ANKDD1AQ495B1 522 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 ZBED5Q49AG3 693 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 FGD3Q5JSP0 725 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 CGB2Q6NT52 195 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 MBOAT2Q6ZWT7 520 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 CYP4Z1Q86W10 505 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 ZNF283Q8N7M2 679 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 DEFB108BQ8NET1 73 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 OR10AD1Q8NGE0 317 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 SAMD8Q96LT4 415 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 SYT4Q9H2B2 425 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 TBCCD1Q9NVR7 557 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 ASH2LQ9UBL3 628 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 ZNF69Q9UC07 566 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 IL20RAQ9UHF4 553 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 NUP50Q9UKX7 468 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 STARD10Q9Y365 291 aa12.23□□□□□ -0.45
SDC1-204ENST00000429035 PRSS37A4D1T9 235 aa12.22□□□□□ -0.45
SDC1-204ENST00000429035 DNAJC9-AS1A6NH13 148 aa12.22□□□□□ -0.45
SDC1-204ENST00000429035 KHDRBS3O75525 346 aaKnown RBP12.22□□□□□ -0.45
SDC1-204ENST00000429035 ZNF205O95201 554 aa12.22□□□□□ -0.45
SDC1-204ENST00000429035 DBHP09172 617 aa12.22□□□□□ -0.45
SDC1-204ENST00000429035 RPS2P15880 293 aaKnown RBP12.22□□□□□ -0.45
SDC1-204ENST00000429035 KITLGP21583 273 aa12.22□□□□□ -0.45
SDC1-204ENST00000429035 MMP16P51512 607 aa12.22□□□□□ -0.45
SDC1-204ENST00000429035 GUCY1A3Q02108 690 aa12.22□□□□□ -0.45
SDC1-204ENST00000429035 FHL1Q13642 323 aa12.22□□□□□ -0.45
SDC1-204ENST00000429035 TMEM155Q4W5P6 130 aa12.22□□□□□ -0.45
SDC1-204ENST00000429035 RNF113BQ8IZP6 322 aaKnown RBP12.22□□□□□ -0.45
SDC1-204ENST00000429035 BCL6BQ8N143 479 aaPredicted RBP12.22□□□□□ -0.45
SDC1-204ENST00000429035 ZNF420Q8TAQ5 688 aaPredicted RBP12.22□□□□□ -0.45
SDC1-204ENST00000429035 KLHL21Q9UJP4 597 aa12.22□□□□□ -0.45
SDC1-204ENST00000429035 TMEM5Q9Y2B1 443 aa12.22□□□□□ -0.45
SDC1-204ENST00000429035 COA3Q9Y2R0 106 aaPredicted RBP12.22□□□□□ -0.45
SDC1-204ENST00000429035 AP3M1Q9Y2T2 418 aa12.22□□□□□ -0.45
SDC1-204ENST00000429035 CEACAM18A8MTB9 384 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 TRAPPC2LH3BP13 241 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 IMPA2O14732 288 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 SASH3O75995 380 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 NDUFB2O95178 105 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 CYB5R3P00387 301 aaPredicted RBP12.21□□□□□ -0.45
SDC1-204ENST00000429035 NCK1P16333 377 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 ZNF12P17014 697 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 ZNF26P17031 533 aaPredicted RBP12.21□□□□□ -0.45
SDC1-204ENST00000429035 MDH2P40926 338 aaKnown RBP12.21□□□□□ -0.45
SDC1-204ENST00000429035 BAMBIQ13145 260 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 HLXQ14774 488 aaPredicted RBP12.21□□□□□ -0.45
SDC1-204ENST00000429035 OR2T2Q6IF00 324 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 CBLL1Q75N03 491 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 FAM122BQ7Z309 247 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 MUC20Q8N307 709 aaPredicted RBP12.21□□□□□ -0.45
SDC1-204ENST00000429035 BHLHE23Q8NDY6 225 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 OR1F12Q8NHA8 337 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 DVL3Q92997 716 aaPredicted RBP12.21□□□□□ -0.45
SDC1-204ENST00000429035 COG8Q96MW5 612 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 SIGLEC11Q96RL6 698 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 WACQ9BTA9 647 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 MS4A7Q9GZW8 240 aaPredicted RBP12.21□□□□□ -0.45
SDC1-204ENST00000429035 IL19Q9UHD0 177 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 AURKCQ9UQB9 309 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 INSIG2Q9Y5U4 225 aa12.21□□□□□ -0.45
SDC1-204ENST00000429035 PPIAL4EA0A075B759 164 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 PPIAL4CA0A0B4J2A2 164 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 PPIAL4DF5H284 164 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 NME4O00746 187 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 RER1O15258 196 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 GPANK1O95872 356 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 H1F0P07305 194 aaKnown RBP12.2□□□□□ -0.46
SDC1-204ENST00000429035 PPIAL4FP0DN26 164 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 SDHAP31040 664 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 FOXL1Q12952 345 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 MEP1BQ16820 701 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 CCDC92Q53HC0 331 aaPredicted RBP12.2□□□□□ -0.46
SDC1-204ENST00000429035 TMPRSS11FQ6ZWK6 438 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 DOK3Q7L591 496 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 JAZF1Q86VZ6 243 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 LRRC28Q86X40 367 aaPredicted RBP12.2□□□□□ -0.46
SDC1-204ENST00000429035 GLB1L2Q8IW92 636 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 SLC15A3Q8IY34 581 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 RSRC1Q96IZ7 334 aaKnown RBP12.2□□□□□ -0.46
SDC1-204ENST00000429035 MEGF10Q96KG7 1140 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 GPA33Q99795 319 aa12.2□□□□□ -0.46
SDC1-204ENST00000429035 KCTD14Q9BQ13 255 aaPredicted RBP12.2□□□□□ -0.46
SDC1-204ENST00000429035 SSBP3Q9BWW4 388 aaPredicted RBP12.2□□□□□ -0.46
SDC1-204ENST00000429035 WDR76Q9H967 626 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms