RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 KHDRBS3O75525 346 aaKnown RBP14.43□□□□□ -0.1
TRIM39-209ENST00000428728 DIRAS1O95057 198 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 IGHV2-70P01814 119 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 SBK2P0C263 348 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 MDH1P40925 334 aaKnown RBP14.43□□□□□ -0.1
TRIM39-209ENST00000428728 ERFP50548 548 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 HILS1P60008 231 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 PSME3P61289 254 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 CDK5R2Q13319 367 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 GPR139Q6DWJ6 353 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 Q6ZR03 302 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 PTCHD4Q6ZW05 846 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 FAM86B1Q8N7N1 296 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 ITLN1Q8WWA0 313 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 CMBLQ96DG6 245 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 C7orf69Q9H7B7 122 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 NDUFAF4Q9P032 175 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 ABCD2Q9UBJ2 740 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 AURKCQ9UQB9 309 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 STARD10Q9Y365 291 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 IER3IP1Q9Y5U9 82 aa14.43□□□□□ -0.1
TRIM39-209ENST00000428728 A0A1W2PRQ8 180 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 NDUFAB1O14561 156 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 GPANK1O95872 356 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 DBHP09172 617 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 KITLGP21583 273 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 OMPP47874 163 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 CENPAP49450 140 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 DGCR6Q14129 220 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 SEC23BQ15437 767 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 GLB1L2Q8IW92 636 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 OR5AS1Q8N127 324 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 BPIFB2Q8N4F0 458 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 RNF148Q8N7C7 305 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 OR52J3Q8NH60 311 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 NANPQ8TBE9 248 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 C22orf15Q8WYQ4 148 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 GPX7Q96SL4 187 aaPredicted RBP14.42□□□□□ -0.1
TRIM39-209ENST00000428728 SUCNR1Q9BXA5 334 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 NUAK2Q9H093 628 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 NRIP3Q9NQ35 241 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 TMEM106BQ9NUM4 274 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 PTTG3PQ9NZH4 202 aa14.42□□□□□ -0.1
TRIM39-209ENST00000428728 OR6C6A6NF89 314 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 UNC119BA6NIH7 251 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 TRIM77I1YAP6 450 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 RER1O15258 196 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 PTP4A3O75365 173 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 FOXH1O75593 365 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 RHCEP18577 417 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 TNFRSF1AP19438 455 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 GATA3P23771 443 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 ZFP36P26651 326 aaKnown RBP14.41□□□□□ -0.1
TRIM39-209ENST00000428728 CFPP27918 469 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 FXYD6P3P58550 94 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 LSM6P62312 80 aaKnown RBP14.41□□□□□ -0.1
TRIM39-209ENST00000428728 MEP1BQ16820 701 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 CCDC92Q53HC0 331 aaPredicted RBP14.41□□□□□ -0.1
TRIM39-209ENST00000428728 GLYATQ6IB77 296 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 USP43Q70EL4 1123 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 ADCK1Q86TW2 530 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 OR1F12Q8NHA8 337 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 TSSK2Q96PF2 358 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 OR2V2Q96R30 315 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 KRCC1Q9NPI7 259 aaPredicted RBP14.41□□□□□ -0.1
TRIM39-209ENST00000428728 ADA2Q9NZK5 511 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 VSX1Q9NZR4 365 aaPredicted RBP14.41□□□□□ -0.1
TRIM39-209ENST00000428728 OPN4Q9UHM6 478 aa14.41□□□□□ -0.1
TRIM39-209ENST00000428728 PPP1R3DO95685 299 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 TUBG1P23258 451 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 RPS6KA3P51812 740 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 SEC61A1P61619 476 aaKnown RBP14.4□□□□□ -0.1
TRIM39-209ENST00000428728 DBPQ10586 325 aaPredicted RBP14.4□□□□□ -0.1
TRIM39-209ENST00000428728 HLXQ14774 488 aaPredicted RBP14.4□□□□□ -0.1
TRIM39-209ENST00000428728 KLHL36Q8N4N3 616 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 SPICQ8N5J4 248 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 ZNF283Q8N7M2 679 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 OR10AD1Q8NGE0 317 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 FANK1Q8TC84 345 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 GCDHQ92947 438 aaPredicted RBP14.4□□□□□ -0.1
TRIM39-209ENST00000428728 HAVCR1Q96D42 359 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 C7orf34Q96L11 122 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 SAMD8Q96LT4 415 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 COG8Q96MW5 612 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 JMJD8Q96S16 334 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 ELAC2Q9BQ52 826 aaKnown RBP14.4□□□□□ -0.1
TRIM39-209ENST00000428728 RBM4Q9BWF3 364 aaKnown RBP14.4□□□□□ -0.1
TRIM39-209ENST00000428728 SPAG4Q9NPE6 437 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 TUBG2Q9NRH3 451 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 SAMD4AQ9UPU9 718 aaKnown RBP14.4□□□□□ -0.1
TRIM39-209ENST00000428728 PPP1R3CQ9UQK1 317 aa14.4□□□□□ -0.1
TRIM39-209ENST00000428728 DCTN6O00399 190 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 SURF4O15260 269 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 GMNNO75496 209 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 FSHBP01225 129 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 CDKN2AP42771 156 aaKnown RBP14.39□□□□□ -0.11
TRIM39-209ENST00000428728 BTG1P62324 171 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 SPIBQ01892 262 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 KRT72Q14CN4 511 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 ZMYND11Q15326 602 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms