RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 ZBTB37Q5TC79 503 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 ASPHD2Q6ICH7 369 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 BPHLQ86WA6 291 aaPredicted RBP7.48□□□□□ -1.21
CD44-208ENST00000428726 RHBDD1Q8TEB9 315 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 SPSB2Q99619 263 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 RBM24Q9BX46 236 aaKnown RBP7.48□□□□□ -1.21
CD44-208ENST00000428726 LAT2Q9GZY6 243 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 C12orf10Q9HB07 376 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 PRELID1Q9Y255 219 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 SLC5A6Q9Y289 635 aa7.48□□□□□ -1.21
CD44-208ENST00000428726 ALG1L2C9J202 215 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 PLPP3O14495 311 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 CCSO14618 274 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 FADS1O60427 444 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 PDGFAP04085 211 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 H2AFB2P0C5Z0 115 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 CCNOP22674 350 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 STARD6P59095 220 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 PITPNAQ00169 270 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 GRK1Q15835 563 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 C3AR1Q16581 482 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 C2orf68Q2NKX9 166 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 C2orf76Q3KRA6 126 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 PLA1AQ53H76 456 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 EMC4Q5J8M3 183 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 UNQ9370/PRO34162Q6UXP9 181 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 SLC16A9Q7RTY1 509 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 OR4K17Q8NGC6 315 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 OR13C3Q8NGS6 347 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 OR51E1Q8TCB6 317 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 SAP25Q8TEE9 199 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 RADILQ96JH8 1075 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 HYLS1Q96M11 299 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 RASL10BQ96S79 203 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 DPAGT1Q9H3H5 408 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 TMEM138Q9NPI0 162 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 PLA2G3Q9NZ20 509 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 MYOTQ9UBF9 498 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 OR4C45A6NMZ5 311 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 GPR171O14626 319 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 TXNDC12O95881 172 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 TACSTD2P09758 323 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 ANXA3P12429 323 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 ZNF41P51814 821 aaPredicted RBP7.47□□□□□ -1.21
CD44-208ENST00000428726 GMFBP60983 142 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 TAF13Q15543 124 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 Q499Y3 187 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 CPEB2Q7Z5Q1 589 aaKnown RBP7.47□□□□□ -1.21
CD44-208ENST00000428726 KCTD20Q7Z5Y7 419 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 GLRX5Q86SX6 157 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 DTX1Q86Y01 620 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 PLCZ1Q86YW0 608 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 ROBO4Q8WZ75 1007 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 ELMOD3Q96FG2 381 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 KLHL15Q96M94 604 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 GINS4Q9BRT9 223 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 COMMD4Q9H0A8 199 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 CLEC4MQ9H2X3 399 aaPredicted RBP7.47□□□□□ -1.21
CD44-208ENST00000428726 ALKBH4Q9NXW9 302 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 WNT16Q9UBV4 365 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 MUC6Q6W4X9 2439 aa7.47□□□□□ -1.21
CD44-208ENST00000428726 MEX3AA1L020 520 aaKnown RBP7.46□□□□□ -1.21
CD44-208ENST00000428726 A8MVM7 634 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 FAM25EA8MYX2 175 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 E9PLN8 166 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 PDCD5O14737 125 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 ARPC5O15511 151 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 UBL3O95164 117 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 CD3DP04234 171 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 CCL2P13500 99 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 POLR2HP52434 150 aaKnown RBP7.46□□□□□ -1.21
CD44-208ENST00000428726 CLDN17P56750 224 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 ZP1P60852 638 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 HSF1Q00613 529 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 NR0B2Q15466 257 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 ESCO2Q56NI9 601 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 TIGD3Q6B0B8 471 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 RHBDD2Q6NTF9 364 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 BAIAP2L2Q6UXY1 529 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 CFAP77Q6ZQR2 320 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 LINC00696Q6ZRV3 163 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 C5orf24Q7Z6I8 188 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 GALNT11Q8NCW6 608 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 OTOSQ8NHW6 89 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 HAVCR2Q8TDQ0 301 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 NUDCD2Q8WVJ2 157 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 C11orf40Q8WZ69 217 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 SEC22AQ96IW7 307 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 CXorf58Q96LI9 332 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 CMTM3Q96MX0 182 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 ZNF385AQ96PM9 386 aaKnown RBP7.46□□□□□ -1.21
CD44-208ENST00000428726 ADAM19Q9H013 955 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 ZNF319Q9P2F9 582 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 PCDHGA5Q9Y5G8 931 aa7.46□□□□□ -1.21
CD44-208ENST00000428726 APC2O95996 2303 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 FXYD6-FXYD2A0A087WZ82 144 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 VSTM2BA6NLU5 285 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 TMEM127O75204 238 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 H2BFMP0C1H6 154 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 GTF2F2P13984 249 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms