RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 PDGFBP01127 241 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-204ENST00000428026 TPOP07202 933 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 OR10J4P0C629 311 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 EPHA5P54756 1037 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 CD300CQ08708 224 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 HSF5Q4G112 596 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-204ENST00000428026 FAM27D1Q5T7N8 215 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 ZBTB37Q5TC79 503 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 LIPHQ8WWY8 451 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 HIPK2Q9H2X6 1198 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 SLC22A11Q9NSA0 550 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 CBY3A6NI87 242 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 GPR171O14626 319 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 OR4E1P0C645 316 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 YPEL5P62699 121 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 TMEM71Q6P5X7 295 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 GCNT2Q8N0V5 402 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 OR2AK2Q8NG84 335 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 STT3BQ8TCJ2 826 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 LCORQ96JN0 433 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-204ENST00000428026 EMC6Q9BV81 110 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 PLA2G12AQ9BZM1 189 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 PHOX2AO14813 284 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.23□□□□□ -0.29
PTPRU-204ENST00000428026 CLRN3Q8NCR9 226 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 OR1M1Q8NGA1 313 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 RPUSD4Q96CM3 377 aaKnown RBP13.23□□□□□ -0.29
PTPRU-204ENST00000428026 ZCCHC4Q9H5U6 513 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 DOCK1Q14185 1865 aa13.23□□□□□ -0.29
PTPRU-204ENST00000428026 ZNF587BE7ETH6 402 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 JTBO76095 146 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 P2RX1P51575 399 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 CARD18P57730 90 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 KLK11Q9UBX7 282 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 PADI1Q9ULC6 663 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 COL5A3P25940 1745 aaPredicted RBP13.22□□□□□ -0.29
PTPRU-204ENST00000428026 TRAF3IP2O43734 574 aaPredicted RBP13.22□□□□□ -0.29
PTPRU-204ENST00000428026 SLC25A35Q3KQZ1 300 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 CORO6Q6QEF8 472 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 KLHDC8BQ8IXV7 354 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 BHLHE23Q8NDY6 225 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 RXFP4Q8TDU9 374 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 UBL7Q96S82 380 aaPredicted RBP13.22□□□□□ -0.29
PTPRU-204ENST00000428026 RYDENQ9NUL5 291 aaKnown RBP13.22□□□□□ -0.29
PTPRU-204ENST00000428026 ZNF230Q9UIE0 474 aaPredicted RBP13.22□□□□□ -0.29
PTPRU-204ENST00000428026 S100A8P05109 93 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 ABOP16442 354 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 DUSP1P28562 367 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 GPR85P60893 370 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 RPUSD3Q6P087 351 aaKnown RBP13.22□□□□□ -0.29
PTPRU-204ENST00000428026 OR6K3Q8NGY3 331 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 OR14A16Q8NHC5 309 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 MMP17Q9ULZ9 603 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 MAP1BP46821 2468 aaKnown RBP13.22□□□□□ -0.29
PTPRU-204ENST00000428026 A0A1B0GTL3 188 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 ZNF727A8MUV8 499 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 ABHD16AO95870 558 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 F10P00742 488 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 RPL12P30050 165 aaKnown RBP13.22□□□□□ -0.29
PTPRU-204ENST00000428026 OR13H1Q8NG92 308 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 OR5M1Q8NGP8 315 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 SEH1LQ96EE3 360 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 PDXPQ96GD0 296 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 C6orf106Q9H6K1 298 aaPredicted RBP13.22□□□□□ -0.29
PTPRU-204ENST00000428026 GPR173Q9NS66 373 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 COL4A1P02462 1669 aa13.22□□□□□ -0.29
PTPRU-204ENST00000428026 FXYD1O00168 92 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 BAP18Q8IXM2 172 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 MFSD4AQ8N468 514 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 OR51E1Q8TCB6 317 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 SLC35A4Q96G79 324 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 HDAC8Q9BY41 377 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 ISYNA1Q9NPH2 558 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 NSG1A0A0A6YYJ2 146 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 DVL1O14640 695 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 AKR7A3O95154 331 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 NXPH2O95156 264 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 GABRA4P48169 554 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 DVL1P1P54792 670 aaPredicted RBP13.21□□□□□ -0.29
PTPRU-204ENST00000428026 SIGIRRQ6IA17 410 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 OR4F5Q8NH21 305 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 OR4F4Q96R69 305 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 FAM221AA4D161 298 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 HS3ST1O14792 307 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 SSSCA1O60232 199 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 CHRM2P08172 466 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 DCBLD2Q96PD2 775 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 CRLF2Q9HC73 371 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 DYNLRB1Q9NP97 96 aa13.21□□□□□ -0.29
PTPRU-204ENST00000428026 A0A1B0GUH1 482 aa13.21□□□□□ -0.3
PTPRU-204ENST00000428026 C1orf140Q5VVS0 124 aa13.21□□□□□ -0.3
PTPRU-204ENST00000428026 TCTE3Q8IZS6 198 aa13.21□□□□□ -0.3
PTPRU-204ENST00000428026 KIRREL1Q96J84 757 aa13.21□□□□□ -0.3
PTPRU-204ENST00000428026 CALHM2Q9HA72 323 aa13.21□□□□□ -0.3
PTPRU-204ENST00000428026 CMC2Q9NRP2 79 aa13.21□□□□□ -0.3
PTPRU-204ENST00000428026 FLVCR1Q9Y5Y0 555 aa13.21□□□□□ -0.3
PTPRU-204ENST00000428026 RGS11O94810 467 aa13.21□□□□□ -0.3
PTPRU-204ENST00000428026 GLSO94925 669 aaPredicted RBP13.21□□□□□ -0.3
PTPRU-204ENST00000428026 ACSM4P0C7M7 580 aa13.21□□□□□ -0.3
PTPRU-204ENST00000428026 OR8U8P0C7N1 319 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms