RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 SPRNQ5BIV9 151 aa16.32■□□□□ 0.2
COL9A2-204ENST00000427563 ZNF362Q5T0B9 420 aaPredicted RBP16.32■□□□□ 0.2
COL9A2-204ENST00000427563 HIST2H3PS2Q5TEC6 136 aa16.32■□□□□ 0.2
COL9A2-204ENST00000427563 HIST2H3AQ71DI3 136 aa16.32■□□□□ 0.2
COL9A2-204ENST00000427563 NPEPL1Q8NDH3 523 aa16.32■□□□□ 0.2
COL9A2-204ENST00000427563 SDR9C7Q8NEX9 313 aa16.32■□□□□ 0.2
COL9A2-204ENST00000427563 IFT27Q9BW83 186 aa16.32■□□□□ 0.2
COL9A2-204ENST00000427563 TRIM15Q9C019 465 aa16.32■□□□□ 0.2
COL9A2-204ENST00000427563 RACGAP1Q9H0H5 632 aa16.32■□□□□ 0.2
COL9A2-204ENST00000427563 CHODLQ9H9P2 273 aa16.32■□□□□ 0.2
COL9A2-204ENST00000427563 SRA1Q9HD15 236 aaKnown RBP16.32■□□□□ 0.2
COL9A2-204ENST00000427563 TMEM160Q9NX00 188 aa16.32■□□□□ 0.2
COL9A2-204ENST00000427563 NKIRAS2Q9NYR9 191 aa16.32■□□□□ 0.2
COL9A2-204ENST00000427563 EIF3KQ9UBQ5 218 aaKnown RBP16.32■□□□□ 0.2
COL9A2-204ENST00000427563 KLHL21Q9UJP4 597 aa16.32■□□□□ 0.2
COL9A2-204ENST00000427563 BHLHE40O14503 412 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 LMX1BO60663 402 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 IGHV1-46P01743 117 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 TFP02787 698 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 DBHP09172 617 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 SELENOVP59797 346 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 MRPS11P82912 194 aaKnown RBP16.31■□□□□ 0.2
COL9A2-204ENST00000427563 RSPO1Q2MKA7 263 aaPredicted RBP16.31■□□□□ 0.2
COL9A2-204ENST00000427563 SLC35F1Q5T1Q4 408 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 ZBTB46Q86UZ6 589 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 SLC26A10Q8NG04 563 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 ZNRF4Q8WWF5 429 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 C1orf159Q96HA4 380 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 MDFIQ99750 246 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 PLEK2Q9NYT0 353 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 NDRG4Q9ULP0 352 aaKnown RBP16.31■□□□□ 0.2
COL9A2-204ENST00000427563 STARD10Q9Y365 291 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 CACNG2Q9Y698 323 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 CDH10Q9Y6N8 788 aa16.31■□□□□ 0.2
COL9A2-204ENST00000427563 LOC100289279A0A1B0GTE1 492 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 RBMXP38159 391 aaKnown RBP16.3■□□□□ 0.2
COL9A2-204ENST00000427563 IFNGR2P38484 337 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 ERFP50548 548 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 CHN2P52757 468 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 PSG7Q13046 419 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 FLOT2Q14254 428 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 CLEC12AQ5QGZ9 265 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 TMEM154Q6P9G4 183 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 CORO6Q6QEF8 472 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 IL17RELQ6ZVW7 336 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.3■□□□□ 0.2
COL9A2-204ENST00000427563 JAZF1Q86VZ6 243 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 ADGRG5Q8IZF4 528 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 CLDND2Q8NHS1 167 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 SNX33Q8WV41 574 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 LRGUKQ96M69 825 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 RPRD1BQ9NQG5 326 aaKnown RBP16.3■□□□□ 0.2
COL9A2-204ENST00000427563 TBCCD1Q9NVR7 557 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 IL20Q9NYY1 176 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 U3KQV3 271 aa16.3■□□□□ 0.2
COL9A2-204ENST00000427563 AQP12BA6NM10 295 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 CDC14BO60729 498 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 CCNB2O95067 398 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 ABHD16AO95870 558 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 PSKH1P11801 424 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 CRABP1P29762 137 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 GCH1P30793 250 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 GPR6P46095 362 aaPredicted RBP16.29■□□□□ 0.2
COL9A2-204ENST00000427563 ZNF81P51508 661 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.29■□□□□ 0.2
COL9A2-204ENST00000427563 CCNIQ14094 377 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 TSTQ16762 297 aaKnown RBP16.29■□□□□ 0.2
COL9A2-204ENST00000427563 OR2T5Q6IEZ7 315 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 AQP12AQ8IXF9 295 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 OR52E2Q8NGJ4 325 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 OR2T29Q8NH02 315 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 OR4Q3Q8NH05 313 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 OR1F12Q8NHA8 337 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 HPS1Q92902 700 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 ELOVL3Q9HB03 270 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 MRPL22Q9NWU5 206 aaKnown RBP16.29■□□□□ 0.2
COL9A2-204ENST00000427563 GPR160Q9UJ42 338 aa16.29■□□□□ 0.2
COL9A2-204ENST00000427563 ERICH4A6NGS2 130 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 H3BSA7 217 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 SPRY3O43610 288 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 IDH3BO43837 385 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 CIB2O75838 187 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 RENP00797 406 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 GGT2P36268 569 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 CRYBB2P43320 205 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 CENPAP49450 140 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 CDH15P55291 814 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 COX10Q12887 443 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 PCGF3Q3KNV8 242 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 KRTAP27-1Q3LI81 207 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 CHRFAM7AQ494W8 412 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 FAM166AQ6J272 317 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 LYPD4Q6UWN0 246 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 CFAP77Q6ZQR2 320 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 Q6ZR03 302 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 RASSF6Q6ZTQ3 369 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 USP51Q70EK9 711 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 TMEM179BQ7Z7N9 219 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 LINC00346Q8IVM7 164 aa16.28■□□□□ 0.2
COL9A2-204ENST00000427563 CYB561A3Q8NBI2 242 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms