RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 PSKH1P11801 424 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 ZNF35P13682 527 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 ZNF3P17036 446 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 APEX1P27695 318 aaKnown RBP6.41□□□□□ -1.38
LINC01049-201ENST00000426840 PEX2P28328 305 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 FMO3P31513 532 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 GGT2P36268 569 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 IDH3GP51553 393 aaPredicted RBP6.41□□□□□ -1.38
LINC01049-201ENST00000426840 PCBD1P61457 104 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 GLO1Q04760 184 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 SPOCK1Q08629 439 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 RIPK1Q13546 671 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 PCK2Q16822 640 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 RSPO1Q2MKA7 263 aaPredicted RBP6.41□□□□□ -1.38
LINC01049-201ENST00000426840 CCDC92Q53HC0 331 aaPredicted RBP6.41□□□□□ -1.38
LINC01049-201ENST00000426840 TEX30Q5JUR7 227 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 ZNF774Q6NX45 483 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 B3GLCTQ6Y288 498 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 CXXC5Q7LFL8 322 aaKnown RBP6.41□□□□□ -1.38
LINC01049-201ENST00000426840 BCDIN3DQ7Z5W3 292 aaKnown RBP6.41□□□□□ -1.38
LINC01049-201ENST00000426840 TMEM200AQ86VY9 491 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 GALNT4Q8N4A0 578 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 PACRGLQ8N7B6 248 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 PROKR2Q8NFJ6 384 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 BBS1Q8NFJ9 593 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 IL17RDQ8NFM7 739 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 KBTBD8Q8NFY9 601 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 AKR7LQ8NHP1 331 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 TMEM163Q8TC26 289 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 NRG4Q8WWG1 115 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 OTULINQ96BN8 352 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 PLEKHA8Q96JA3 519 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 RADILQ96JH8 1075 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 POM121L2Q96KW2 1035 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 Q96M66 194 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 TEAD3Q99594 435 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 TEX12Q9BXU0 123 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 OR51V1Q9H2C8 321 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 LIME1Q9H400 295 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 WDR76Q9H967 626 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 RNPEPL1Q9HAU8 725 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 CCNB1IP1Q9NPC3 277 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 FAM118AQ9NWS6 357 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 CYB5R1Q9UHQ9 305 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 FBXL3Q9UKT7 428 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 NDRG4Q9ULP0 352 aaKnown RBP6.41□□□□□ -1.38
LINC01049-201ENST00000426840 RNF115Q9Y4L5 304 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 LHFPL6Q9Y693 200 aa6.41□□□□□ -1.38
LINC01049-201ENST00000426840 RAI1Q7Z5J4 1906 aaPredicted RBP6.4□□□□□ -1.38
LINC01049-201ENST00000426840 SPG11Q96JI7 2443 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 LOC100130705A0A1B0GUX0 176 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 IQCMA0A1B0GVH7 501 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 SLC22A31A6NKX4 558 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 ATP6V1G2-DDX39BF2Z307 99 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 ZNF593O00488 134 aaPredicted RBP6.4□□□□□ -1.38
LINC01049-201ENST00000426840 HS3ST1O14792 307 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 RER1O15258 196 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 PRODHO43272 600 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 SGCEO43556 437 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 RRP9O43818 475 aaKnown RBP6.4□□□□□ -1.38
LINC01049-201ENST00000426840 RAB36O95755 333 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 PTHP01270 115 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 HLA-DQA2P01906 255 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 CRYAAP02489 173 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 COX5BP10606 129 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 CCL2P13500 99 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 PAICSP22234 425 aaKnown RBP6.4□□□□□ -1.38
LINC01049-201ENST00000426840 RPS27P42677 84 aaKnown RBP6.4□□□□□ -1.38
LINC01049-201ENST00000426840 BLVRAP53004 296 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 NKX6-1P78426 367 aaPredicted RBP6.4□□□□□ -1.38
LINC01049-201ENST00000426840 PLP2Q04941 152 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 SCRN3Q0VDG4 424 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 AQP6Q13520 282 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 APOFQ13790 326 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 ZNF672Q499Z4 452 aaPredicted RBP6.4□□□□□ -1.38
LINC01049-201ENST00000426840 SLC35D3Q5M8T2 416 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 FBXW10Q5XX13 1052 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 SLC18B1Q6NT16 456 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 CORO6Q6QEF8 472 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 SLC22A25Q6T423 547 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 MEPCEQ7L2J0 689 aaKnown RBP6.4□□□□□ -1.38
LINC01049-201ENST00000426840 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.4□□□□□ -1.38
LINC01049-201ENST00000426840 LINC00346Q8IVM7 164 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 TIGD4Q8IY51 512 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 PAQR4Q8N4S7 273 aaPredicted RBP6.4□□□□□ -1.38
LINC01049-201ENST00000426840 ZNF611Q8N823 705 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 GJC3Q8NFK1 279 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 OR8J1Q8NGP2 316 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 TRUB1Q8WWH5 349 aaKnown RBP6.4□□□□□ -1.38
LINC01049-201ENST00000426840 IGFBPL1Q8WX77 278 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 AKAP1Q92667 903 aaKnown RBP eCLIP6.4□□□□□ -1.38
LINC01049-201ENST00000426840 NRGNQ92686 78 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 ZMYND19Q96E35 227 aaPredicted RBP6.4□□□□□ -1.38
LINC01049-201ENST00000426840 LURAP1Q96LR2 239 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 RDH12Q96NR8 316 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 IL4I1Q96RQ9 567 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 PITX2Q99697 317 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 C1orf198Q9H425 327 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 C8orf4Q9NR00 106 aa6.4□□□□□ -1.38
LINC01049-201ENST00000426840 SMPD3Q9NY59 655 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms