RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 NDUFAF6Q330K2 333 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 HACD4Q5VWC8 232 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 OGFOD3Q6PK18 319 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 TMPRSS11FQ6ZWK6 438 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 LRRC18Q8N456 261 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 PAQR4Q8N4S7 273 aaPredicted RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 OR6K6Q8NGW6 343 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 SUN5Q8TC36 379 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 PSMF1Q92530 271 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 COX14Q96I36 57 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 TRIM8Q9BZR9 551 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 LYRM4Q9HD34 91 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 TRMT1Q9NXH9 659 aaKnown RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 TMEM181Q9P2C4 612 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 HDGFL3Q9Y3E1 203 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 CCL27Q9Y4X3 112 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 PCDHA9Q9Y5H5 950 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 CEPT1Q9Y6K0 416 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 HSPE1-MOB4S4R3N1 261 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 CREBBPQ92793 2442 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 A0A087WXM4 84 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 BORCS7-ASMTA0A0B4J1R7 106 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 NPIPB15A6NHN6 443 aaPredicted RBP3.16□□□□□ -1.9
TOP2A-201ENST00000423485 FAM157AC9JC47 383 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 GPR39O43194 453 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF264O43296 627 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 UBOX5O94941 541 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 UTS2O95399 124 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 HLA-DQB2P05538 268 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 S1PR1P21453 382 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 COMTP21964 271 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 PGFP49763 221 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 PKNOX1P55347 436 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 GNG2P59768 71 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 RAB2AP61019 212 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 RHOBP62745 196 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 LTC4SQ16873 150 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 WBP2NLQ6ICG8 309 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 LCN12Q6JVE5 192 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 STEAP1BQ6NZ63 245 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 Q6ZS92 163 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 SLC35D2Q76EJ3 337 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 ARPINQ7Z6K5 226 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 CSNK2A3Q8NEV1 391 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 OR13C5Q8NGS8 318 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 OR6F1Q8NGZ6 308 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 DCUN1D4Q92564 292 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 BORCS7Q96B45 105 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 MOB3AQ96BX8 217 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 BPIFA2Q96DR5 249 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 GINS3Q9BRX5 216 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 C20orf24Q9BUV8 137 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 VN1R3Q9BXE9 311 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 GSX2Q9BZM3 304 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 RAB33BQ9H082 229 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 OR51I1Q9H343 314 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 POPDC3Q9HBV1 291 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 CES1P1Q9UKY3 287 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 SLC22A7Q9Y694 548 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 MED13Q9UHV7 2174 aa3.16□□□□□ -1.9
TOP2A-201ENST00000423485 IGHV5-51A0A0C4DH38 117 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 A0A1W2PQF6 199 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 RBMY1BA6NDE4 496 aaKnown RBP3.15□□□□□ -1.9
TOP2A-201ENST00000423485 RBMY1EA6NEQ0 496 aaKnown RBP3.15□□□□□ -1.9
TOP2A-201ENST00000423485 HOXA3O43365 443 aaPredicted RBP3.15□□□□□ -1.9
TOP2A-201ENST00000423485 GATCO43716 136 aaKnown RBP3.15□□□□□ -1.9
TOP2A-201ENST00000423485 MFSD11O43934 449 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 CISD3P0C7P0 127 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 RBMY1DP0C7P1 496 aaKnown RBP3.15□□□□□ -1.9
TOP2A-201ENST00000423485 ZCCHC18P0CG32 403 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 SLC2A1P11166 492 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 NAT1P18440 290 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 CBLP22681 906 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 TIA1P31483 386 aaKnown RBP eCLIP3.15□□□□□ -1.93e-7■■■■■ 32.3
TOP2A-201ENST00000423485 PTGER1P34995 402 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 RCVRNP35243 200 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 SNCAP37840 140 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 SLC6A12P48065 614 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 IDH2P48735 452 aaKnown RBP3.15□□□□□ -1.9
TOP2A-201ENST00000423485 TRA2BP62995 288 aaKnown RBP3.15□□□□□ -1.9
TOP2A-201ENST00000423485 B4GALNT1Q00973 533 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 ARFRP1Q13795 201 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF181Q2M3W8 571 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 ZBED5Q49AG3 693 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 BCL7AQ4VC05 210 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 LBHQ53QV2 105 aaPredicted RBP3.15□□□□□ -1.9
TOP2A-201ENST00000423485 AADACL4Q5VUY2 407 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 ERICH5Q6P6B1 374 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 TMEM64Q6YI46 380 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 TP53I13Q8NBR0 393 aaPredicted RBP3.15□□□□□ -1.9
TOP2A-201ENST00000423485 THEM6Q8WUY1 208 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 SGTBQ96EQ0 304 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 C1GALT1C1Q96EU7 318 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 CST11Q9H112 138 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 XYLT2Q9H1B5 865 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 POLEQ07864 2286 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 A0A1B0GVG6 124 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 A0A1W2PS18 150 aa3.15□□□□□ -1.9
TOP2A-201ENST00000423485 RPS4Y1P22090 263 aaKnown RBP3.15□□□□□ -1.9
TOP2A-201ENST00000423485 TUBG1P23258 451 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms