RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 IGHV2-70P01814 119 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 PPIAL4FP0DN26 164 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 RGS6P49758 472 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 LSM6P62312 80 aaKnown RBP9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 PGM2L1Q6PCE3 622 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 ZNF771Q7L3S4 317 aaPredicted RBP9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 TSEN54Q7Z6J9 526 aaKnown RBP9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 TREML1Q86YW5 311 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 GLB1L2Q8IW92 636 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 NANPQ8TBE9 248 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 FAM216AQ8WUB2 273 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 DCLRE1CQ96SD1 692 aaKnown RBP9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 SPAG4Q9NPE6 437 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 MED4Q9NPJ6 270 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 NRIP3Q9NQ35 241 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 VSX1Q9NZR4 365 aaPredicted RBP9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 NDUFAF4Q9P032 175 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 ASH2LQ9UBL3 628 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 SAMD4AQ9UPU9 718 aaKnown RBP9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 POLR1DQ9Y2S0 133 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 NPTNQ9Y639 398 aa9.77□□□□□ -0.85
SQSTM1-203ENST00000422245 PTP4A3O75365 173 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 RGS9O75916 674 aaPredicted RBP9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 TXNDC12O95881 172 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 NCK1P16333 377 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 RHCEP18577 417 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 MDH1P40925 334 aaKnown RBP9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 OMPP47874 163 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 COMPP49747 757 aaPredicted RBP9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 RPS6KA3P51812 740 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 PSME3P61289 254 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 LCN2P80188 198 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 TMEM155Q4W5P6 130 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 DNM1P34Q6PK57 102 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 DPY19L2P2Q6ZN68 376 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 BPIFB2Q8N4F0 458 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 KLHL36Q8N4N3 616 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 ZNF283Q8N7M2 679 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 OR2Z1Q8NG97 314 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 OR1F12Q8NHA8 337 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 HAVCR1Q96D42 359 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 CMTM5Q96DZ9 223 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 DHRS1Q96LJ7 313 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 SAMD8Q96LT4 415 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 POFUT1Q9H488 388 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 RERGLQ9H628 205 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 C7orf69Q9H7B7 122 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 IL19Q9UHD0 177 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 AURKCQ9UQB9 309 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 TENM1Q9UKZ4 2725 aa9.76□□□□□ -0.85
SQSTM1-203ENST00000422245 DYSFO75923 2080 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 TRBV4-1A0A0J9YWV2 114 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 UNC119BA6NIH7 251 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 IFNL4K9M1U5 179 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 SOCS2O14508 198 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 GMNNO75496 209 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 FSHBP01225 129 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 RAC2P15153 192 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 ADRA2CP18825 462 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 CFPP27918 469 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 CRABP1P29762 137 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 BTG1P62324 171 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 KRT72Q14CN4 511 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 KCNMB1Q16558 191 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 SPRNQ5BIV9 151 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 Q6ZR03 302 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 OR5L1Q8NGL2 311 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 FANK1Q8TC84 345 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 CMBLQ96DG6 245 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 ZMYND19Q96E35 227 aaPredicted RBP9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 SLC6A7Q99884 636 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 NUAK2Q9H093 628 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 HDHD2Q9H0R4 259 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 DCAF13Q9NV06 445 aaKnown RBP9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 DCAF16Q9NXF7 216 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 OPN4Q9UHM6 478 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 PPP1R3CQ9UQK1 317 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 COA3Q9Y2R0 106 aaPredicted RBP9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 STARD10Q9Y365 291 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 IER3IP1Q9Y5U9 82 aa9.75□□□□□ -0.85
SQSTM1-203ENST00000422245 A8MXK9 166 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 RER1O15258 196 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 SBK2P0C263 348 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 FPR2P25090 351 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 PRDX6P30041 224 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 MDH2P40926 338 aaKnown RBP9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 MMP16P51512 607 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 SMIM11AP58511 58 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 FXYD6P3P58550 94 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 ZMYND11Q15326 602 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 SEC23BQ15437 767 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 CCDC92Q53HC0 331 aaPredicted RBP9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 GLYATQ6IB77 296 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 SLC27A4Q6P1M0 643 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 C1orf94Q6P1W5 598 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 SMARCD3Q6STE5 483 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 FBXW12Q6X9E4 464 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 PTCHD4Q6ZW05 846 aa9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 MUC20Q8N307 709 aaPredicted RBP9.74□□□□□ -0.85
SQSTM1-203ENST00000422245 DEFB108BQ8NET1 73 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms