RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 TMEM127O75204 238 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 IGHV2-5P01817 119 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 THY1P04216 161 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 OR8G3PP0DMU2 310 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 ZNF19P17023 458 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 CAPZBP47756 277 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 PITPNAQ00169 270 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 PRICKLE4Q2TBC4 344 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 MORN4Q8NDC4 146 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 OR11G2Q8NGC1 345 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 APOBEC4Q8WW27 367 aaKnown RBP13.12□□□□□ -0.31
CHRD-204ENST00000420973 DIO2Q92813 273 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 OSTF1Q92882 214 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 ANKRD9Q96BM1 317 aaPredicted RBP13.12□□□□□ -0.31
CHRD-204ENST00000420973 SEC11CQ9BY50 192 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 TMPRSS13Q9BYE2 586 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 A0A1B0GWA3 101 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 H7C1C5 153 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 SYT5O00445 386 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 DLEU1O43261 78 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 PLGP00747 810 aaPredicted RBP13.12□□□□□ -0.31
CHRD-204ENST00000420973 DIO1P49895 249 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 RAB38P57729 211 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 LCN6P62502 163 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 PHF19Q5T6S3 580 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 FAM27D1Q5T7N8 215 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 THSD4Q6ZMP0 1018 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 CXXC5Q7LFL8 322 aaKnown RBP13.12□□□□□ -0.31
CHRD-204ENST00000420973 OR2L13Q8N349 312 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 OR4C6Q8NH72 309 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 C22orf15Q8WYQ4 148 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 ELF4Q99607 663 aaPredicted RBP13.12□□□□□ -0.31
CHRD-204ENST00000420973 NDC1Q9BTX1 674 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 BCL2L10Q9HD36 194 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 HINT3Q9NQE9 182 aaKnown RBP13.12□□□□□ -0.31
CHRD-204ENST00000420973 FLRT3Q9NZU0 649 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 KCND3Q9UK17 655 aa13.12□□□□□ -0.31
CHRD-204ENST00000420973 A0A1B0GUH1 482 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 C11orf98E9PRG8 122 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 NPIPB9F8W1W9 429 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 PPIHO43447 177 aaKnown RBP13.11□□□□□ -0.31
CHRD-204ENST00000420973 HCRTR2O43614 444 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 HEXAP06865 529 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 DBIP07108 87 aaKnown RBP13.11□□□□□ -0.31
CHRD-204ENST00000420973 PIPP12273 146 aaPredicted RBP13.11□□□□□ -0.31
CHRD-204ENST00000420973 FOLR2P14207 255 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 RPS27P42677 84 aaKnown RBP13.11□□□□□ -0.31
CHRD-204ENST00000420973 RAG2P55895 527 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 H2BFSP57053 126 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 SLC36A4Q6YBV0 504 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 BEST3Q8N1M1 668 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 OR52E2Q8NGJ4 325 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 NT5CQ8TCD5 201 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 ROBO4Q8WZ75 1007 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 CCDC86Q9H6F5 360 aaKnown RBP13.11□□□□□ -0.31
CHRD-204ENST00000420973 SIDT1Q9NXL6 827 aaKnown RBP13.11□□□□□ -0.31
CHRD-204ENST00000420973 ZNF346Q9UL40 294 aaKnown RBP13.11□□□□□ -0.31
CHRD-204ENST00000420973 FREM2Q5SZK8 3169 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 FAM86C2PA6NEL3 165 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 UNC119BA6NIH7 251 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 FOXS1O43638 330 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 GDF9O60383 454 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 SFTA3P0C7M3 94 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 LIMS1P48059 325 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 ZNF84P51523 738 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 SKP1P63208 163 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 OR7A5Q15622 319 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 EIPR1Q53HC9 387 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 RNASE10Q5GAN6 216 aaKnown RBP13.11□□□□□ -0.31
CHRD-204ENST00000420973 DCAF12L2Q5VW00 463 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 RPTNQ6XPR3 784 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 MAML2Q8IZL2 1156 aaPredicted RBP13.11□□□□□ -0.31
CHRD-204ENST00000420973 HCAR1Q9BXC0 346 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 OR10A5Q9H207 317 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 SH3BGRL2Q9UJC5 107 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 TRDV1A0A1B0GX56 115 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 RCC1P18754 421 aaPredicted RBP13.11□□□□□ -0.31
CHRD-204ENST00000420973 GSTM3P21266 225 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 NME2P22392 152 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 CD80P33681 288 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 CD200P41217 278 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 CDX1P47902 265 aaPredicted RBP13.11□□□□□ -0.31
CHRD-204ENST00000420973 AFF3P51826 1226 aaKnown RBP13.11□□□□□ -0.31
CHRD-204ENST00000420973 ZNF674Q2M3X9 581 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 PRPF38BQ5VTL8 546 aaKnown RBP13.11□□□□□ -0.31
CHRD-204ENST00000420973 HIST2H3AQ71DI3 136 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 GPR137CQ8N3F9 429 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 THAP4Q8WY91 577 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 TM4SF19Q96DZ7 209 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 UBQLN3Q9H347 655 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 BARX1Q9HBU1 254 aaPredicted RBP13.11□□□□□ -0.31
CHRD-204ENST00000420973 NPDC1Q9NQX5 325 aaPredicted RBP13.11□□□□□ -0.31
CHRD-204ENST00000420973 CUTCQ9NTM9 273 aa13.11□□□□□ -0.31
CHRD-204ENST00000420973 DAPL1A0PJW8 107 aa13.1□□□□□ -0.31
CHRD-204ENST00000420973 TBX19O60806 448 aa13.1□□□□□ -0.31
CHRD-204ENST00000420973 IGKV1D-16P01601 117 aa13.1□□□□□ -0.31
CHRD-204ENST00000420973 NID1P14543 1247 aa13.1□□□□□ -0.31
CHRD-204ENST00000420973 FOLR1P15328 257 aa13.1□□□□□ -0.31
CHRD-204ENST00000420973 MPGP29372 298 aa13.1□□□□□ -0.31
CHRD-204ENST00000420973 CCR5P51681 352 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms