RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 PLEK2Q9NYT0 353 aa12.42□□□□□ -0.42
PTPN18-204ENST00000420717 POLR1DQ9Y2S0 133 aa12.42□□□□□ -0.42
PTPN18-204ENST00000420717 CMAHPQ9Y471 501 aa12.42□□□□□ -0.42
PTPN18-204ENST00000420717 USF3Q68DE3 2245 aa12.42□□□□□ -0.42
PTPN18-204ENST00000420717 RTTNQ86VV8 2226 aa12.42□□□□□ -0.42
PTPN18-204ENST00000420717 TMEM129A0AVI4 362 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 C5orf49A4QMS7 147 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 FAM183AA6NL82 134 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 VSTM5A8MXK1 200 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 EI24O14681 340 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 GYPBP06028 91 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 PSKH1P11801 424 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 BMP4P12644 408 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 CCL2P13500 99 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 FLNAP21333 2647 aaKnown RBP12.41□□□□□ -0.42
PTPN18-204ENST00000420717 OTX1P32242 354 aaPredicted RBP12.41□□□□□ -0.42
PTPN18-204ENST00000420717 HTR5AP47898 357 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 ENTPD1P49961 510 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 UCP2P55851 309 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 SNRPD2P62316 118 aaKnown RBP12.41□□□□□ -0.42
PTPN18-204ENST00000420717 TMEM236Q5W0B7 351 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 CFAP77Q6ZQR2 320 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 DNM1P46Q6ZS02 220 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 RFPL4BQ6ZWI9 263 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 RHOUQ7L0Q8 258 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 TIGD4Q8IY51 512 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 STMN2Q93045 179 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 MAP6Q96JE9 813 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 DOK1Q99704 481 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 C9orf16Q9BUW7 83 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 TBCCD1Q9NVR7 557 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 GDF2Q9UK05 429 aaPredicted RBP12.41□□□□□ -0.42
PTPN18-204ENST00000420717 VPS13CQ709C8 3753 aa12.41□□□□□ -0.42
PTPN18-204ENST00000420717 FAM171A2A8MVW0 826 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 PRKYO43930 277 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 ZNF823P16415 610 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 RAD23AP54725 363 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 ADAM8P78325 824 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 SNAPC1Q16533 368 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 MBNL2Q5VZF2 373 aaKnown RBP12.4□□□□□ -0.42
PTPN18-204ENST00000420717 OTPQ5XKR4 325 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 PLBD1Q6P4A8 553 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 ARL9Q6T311 187 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 LYPD4Q6UWN0 246 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 COLCA1Q6ZS62 124 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 CXXC5Q7LFL8 322 aaKnown RBP12.4□□□□□ -0.42
PTPN18-204ENST00000420717 CPOQ8IVL8 374 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 CBR4Q8N4T8 237 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 OR51L1Q8NGJ5 315 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 OR10S1Q8NGN2 331 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 OR6K6Q8NGW6 343 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 TMEM163Q8TC26 289 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 ST7LQ8TDW4 575 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 TRMT61AQ96FX7 289 aaKnown RBP12.4□□□□□ -0.42
PTPN18-204ENST00000420717 PLEKHA8Q96JA3 519 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 CACNG6Q9BXT2 260 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 MRPL37Q9BZE1 423 aaKnown RBP12.4□□□□□ -0.42
PTPN18-204ENST00000420717 MED20Q9H944 212 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 WDR76Q9H967 626 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 ELOVL3Q9HB03 270 aa12.4□□□□□ -0.42
PTPN18-204ENST00000420717 BARX1Q9HBU1 254 aaPredicted RBP12.4□□□□□ -0.42
PTPN18-204ENST00000420717 TVP23AA6NH52 213 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 IGHV4-39P01824 125 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 HLA-DQA2P01906 255 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 GSTT1P30711 240 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 CDKN1AP38936 164 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 RGS6P49758 472 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 GGTLC2Q14390 218 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 RSPO1Q2MKA7 263 aaPredicted RBP12.39□□□□□ -0.43
PTPN18-204ENST00000420717 Q5PR19 223 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 AADACL4Q5VUY2 407 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 NXNL2Q5VZ03 156 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 RGS7BPQ6MZT1 257 aaPredicted RBP12.39□□□□□ -0.43
PTPN18-204ENST00000420717 CORO6Q6QEF8 472 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 LINC00346Q8IVM7 164 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 ZNF511Q8NB15 262 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 MARS2Q96GW9 593 aaKnown RBP12.39□□□□□ -0.43
PTPN18-204ENST00000420717 HRASLS5Q96KN8 279 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 C4orf45Q96LM5 186 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 COG8Q96MW5 612 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 RDH12Q96NR8 316 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 INTS14Q96SY0 518 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 PITX2Q99697 317 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 ATF6BQ99941 703 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 C8orf4Q9NR00 106 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 TVP23BQ9NYZ1 205 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 EIF3KQ9UBQ5 218 aaKnown RBP12.39□□□□□ -0.43
PTPN18-204ENST00000420717 PMF1-BGLAPU3KQ54 211 aa12.39□□□□□ -0.43
PTPN18-204ENST00000420717 CCDC182A6NF36 153 aa12.38□□□□□ -0.43
PTPN18-204ENST00000420717 ABHD16AO95870 558 aa12.38□□□□□ -0.43
PTPN18-204ENST00000420717 IGHV3-13P01766 116 aa12.38□□□□□ -0.43
PTPN18-204ENST00000420717 FAM157BP0CG42 384 aa12.38□□□□□ -0.43
PTPN18-204ENST00000420717 ATP5J2P56134 94 aa12.38□□□□□ -0.43
PTPN18-204ENST00000420717 VHLLQ6RSH7 139 aa12.38□□□□□ -0.43
PTPN18-204ENST00000420717 ZNF454Q8N9F8 522 aa12.38□□□□□ -0.43
PTPN18-204ENST00000420717 BBS1Q8NFJ9 593 aa12.38□□□□□ -0.43
PTPN18-204ENST00000420717 OR8J1Q8NGP2 316 aa12.38□□□□□ -0.43
PTPN18-204ENST00000420717 OR2AJ1Q8NGZ0 328 aa12.38□□□□□ -0.43
PTPN18-204ENST00000420717 RNF133Q8WVZ7 376 aa12.38□□□□□ -0.43
PTPN18-204ENST00000420717 PERPQ96FX8 193 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms