RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 PTH2RP49190 550 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 ENTPD1P49961 510 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 RPS23P62266 143 aaKnown RBP10.75□□□□□ -0.69
SKA1-203ENST00000417656 HIST1H3AP68431 136 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 KLHL12Q53G59 568 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 HIST2H3PS2Q5TEC6 136 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 TMEM154Q6P9G4 183 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 HIST2H3AQ71DI3 136 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 ZNF101Q8IZC7 436 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 GJC3Q8NFK1 279 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 OR2AJ1Q8NGZ0 328 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 OR1F12Q8NHA8 337 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 EME1Q96AY2 570 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 ZMYND19Q96E35 227 aaPredicted RBP10.75□□□□□ -0.69
SKA1-203ENST00000417656 MAP6Q96JE9 813 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 CDADC1Q9BWV3 514 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 CACNG6Q9BXT2 260 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 HDHD2Q9H0R4 259 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 CYB5R1Q9UHQ9 305 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 FZR1Q9UM11 496 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 ORC6Q9Y5N6 252 aa10.75□□□□□ -0.69
SKA1-203ENST00000417656 OTOGQ6ZRI0 2925 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 OVOL3O00110 214 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 PRODHO43272 600 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 SELENOFO60613 162 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 TMCC2O75069 709 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 ABHD16AO95870 558 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 LCKP06239 509 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 DBHP09172 617 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 ANPEPP15144 967 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 PCSK6P29122 969 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 GSTT1P30711 240 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 BLVRAP53004 296 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 RAD23AP54725 363 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 RPS7P62081 194 aaKnown RBP10.74□□□□□ -0.69
SKA1-203ENST00000417656 SNRPD2P62316 118 aaKnown RBP10.74□□□□□ -0.69
SKA1-203ENST00000417656 TRIP10Q15642 601 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 EFNB3Q15768 340 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 MST1LQ2TV78 715 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 ZIK1Q3SY52 487 aaPredicted RBP10.74□□□□□ -0.69
SKA1-203ENST00000417656 ELFN2Q5R3F8 820 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 SPATA46Q5T0L3 261 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 RGS7BPQ6MZT1 257 aaPredicted RBP10.74□□□□□ -0.69
SKA1-203ENST00000417656 BCDIN3DQ7Z5W3 292 aaKnown RBP10.74□□□□□ -0.69
SKA1-203ENST00000417656 KRTAP1-3Q8IUG1 177 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 ERI1Q8IV48 349 aaKnown RBP10.74□□□□□ -0.69
SKA1-203ENST00000417656 TCEANCQ8N8B7 351 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 OR10S1Q8NGN2 331 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 OR6N2Q8NGY6 317 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 ABHD4Q8TB40 342 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 MRPL24Q96A35 216 aaKnown RBP10.74□□□□□ -0.69
SKA1-203ENST00000417656 INTS14Q96SY0 518 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 MBOAT4Q96T53 435 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 COQ7Q99807 217 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 SLC29A1Q99808 456 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 SYT3Q9BQG1 590 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 MRPL37Q9BZE1 423 aaKnown RBP10.74□□□□□ -0.69
SKA1-203ENST00000417656 GSX2Q9BZM3 304 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 GRIP2Q9C0E4 1043 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 CXXC4Q9H2H0 198 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 PLK3Q9H4B4 646 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 PNRC2Q9NPJ4 139 aaKnown RBP10.74□□□□□ -0.69
SKA1-203ENST00000417656 ZNF701Q9NV72 531 aaPredicted RBP10.74□□□□□ -0.69
SKA1-203ENST00000417656 ATPIF1Q9UII2 106 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 CMAHPQ9Y471 501 aa10.74□□□□□ -0.69
SKA1-203ENST00000417656 PRRC2AP48634 2157 aaKnown RBP10.74□□□□□ -0.69
SKA1-203ENST00000417656 AKAP9Q99996 3911 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 CCDC182A6NF36 153 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 B9A039 149 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 NDUFS7O75251 213 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 PEX2P28328 305 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 NAA10P41227 235 aaPredicted RBP10.73□□□□□ -0.69
SKA1-203ENST00000417656 UCP2P55851 309 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 ATP5J2P56134 94 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 ELF3P78545 371 aaPredicted RBP10.73□□□□□ -0.69
SKA1-203ENST00000417656 APOFQ13790 326 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 TESK1Q15569 626 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 SWI5Q1ZZU3 235 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 Q5PR19 223 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 ZBTB49Q6ZSB9 765 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 DCXRQ7Z4W1 244 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 LRP11Q86VZ4 500 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 TIGD4Q8IY51 512 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 LRRC75A-AS1Q8N1F1 130 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 OR1J1Q8NGS3 322 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 TMEM163Q8TC26 289 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 C4orf45Q96LM5 186 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 IL4I1Q96RQ9 567 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 PITX2Q99697 317 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 ATF6BQ99941 703 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 BCL2L14Q9BZR8 327 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 TOR3AQ9H497 397 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 MARCH7Q9H992 704 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 MYEF2Q9P2K5 600 aaKnown RBP10.73□□□□□ -0.69
SKA1-203ENST00000417656 EIF3KQ9UBQ5 218 aaKnown RBP10.73□□□□□ -0.69
SKA1-203ENST00000417656 USF3Q68DE3 2245 aa10.73□□□□□ -0.69
SKA1-203ENST00000417656 ARFGEF3Q5TH69 2177 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 A0A1W2PPW3 197 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 TMEM129A0AVI4 362 aa10.72□□□□□ -0.69
SKA1-203ENST00000417656 ZNF593O00488 134 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms