RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ELMOD3Q96FG2 381 aa12.78□□□□□ -0.36
UBXN4-203ENST00000416538 PYURFQ96I23 114 aa12.78□□□□□ -0.36
UBXN4-203ENST00000416538 NSRP1Q9H0G5 558 aaKnown RBP12.78□□□□□ -0.36
UBXN4-203ENST00000416538 OR52D1Q9H346 318 aa12.78□□□□□ -0.36
UBXN4-203ENST00000416538 FN3KQ9H479 309 aa12.78□□□□□ -0.36
UBXN4-203ENST00000416538 METTL17Q9H7H0 456 aaPredicted RBP12.78□□□□□ -0.36
UBXN4-203ENST00000416538 DECR2Q9NUI1 292 aa12.78□□□□□ -0.36
UBXN4-203ENST00000416538 TBCCD1Q9NVR7 557 aa12.78□□□□□ -0.36
UBXN4-203ENST00000416538 PLEK2Q9NYT0 353 aa12.78□□□□□ -0.36
UBXN4-203ENST00000416538 MAGEL2Q9UJ55 1249 aa12.78□□□□□ -0.36
UBXN4-203ENST00000416538 PURGQ9UJV8 347 aaKnown RBP12.78□□□□□ -0.36
UBXN4-203ENST00000416538 AURKCQ9UQB9 309 aa12.78□□□□□ -0.36
UBXN4-203ENST00000416538 STARD10Q9Y365 291 aa12.78□□□□□ -0.36
UBXN4-203ENST00000416538 PLSCR5A0PG75 271 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 PLPP2O43688 288 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 TIMM8AO60220 97 aaPredicted RBP12.77□□□□□ -0.37
UBXN4-203ENST00000416538 GADD45GO95257 159 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 MT-ND5P03915 603 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 LSM6P62312 80 aaKnown RBP12.77□□□□□ -0.37
UBXN4-203ENST00000416538 GNGT1P63211 74 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 HIST1H3AP68431 136 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 CDK5R2Q13319 367 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 KCNMB1Q16558 191 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 HIST2H3PS2Q5TEC6 136 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 CORO6Q6QEF8 472 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 SMARCD3Q6STE5 483 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 HIST2H3AQ71DI3 136 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 PIGWQ7Z7B1 504 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.77□□□□□ -0.37
UBXN4-203ENST00000416538 GLB1L2Q8IW92 636 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 SEMA6DQ8NFY4 1073 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 CCL17Q92583 94 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 ERMAPQ96PL5 475 aaPredicted RBP12.77□□□□□ -0.37
UBXN4-203ENST00000416538 CDRT15Q96T59 188 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 NMNAT3Q96T66 252 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 WACQ9BTA9 647 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 TMPRSS13Q9BYE2 586 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 ELOVL3Q9HB03 270 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 TAGLN3Q9UI15 199 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 GRIP1Q9Y3R0 1128 aa12.77□□□□□ -0.37
UBXN4-203ENST00000416538 LOC105371242A0A075B767 164 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 VENTXO95231 258 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 PSKH1P11801 424 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 HIST1H1CP16403 213 aaKnown RBP12.76□□□□□ -0.37
UBXN4-203ENST00000416538 KITLGP21583 273 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 FPR3P25089 353 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 RRM2P31350 389 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 GUCA1AP43080 201 aaPredicted RBP12.76□□□□□ -0.37
UBXN4-203ENST00000416538 GSSP48637 474 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 PRSS12P56730 875 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 TEKQ02763 1124 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 HLXQ14774 488 aaPredicted RBP12.76□□□□□ -0.37
UBXN4-203ENST00000416538 MOGQ16653 247 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 RSPO1Q2MKA7 263 aaPredicted RBP12.76□□□□□ -0.37
UBXN4-203ENST00000416538 HFEQ30201 348 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 C1orf94Q6P1W5 598 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 PGBD2Q6P3X8 592 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 ZNF620Q6ZNG0 422 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 CFAP77Q6ZQR2 320 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 CPLX4Q7Z7G2 160 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 OR6V1Q8N148 313 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 RFLNBQ8N5W9 214 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 NPEPL1Q8NDH3 523 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 SLC26A10Q8NG04 563 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 OR4K13Q8NH42 304 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 OR1F12Q8NHA8 337 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 CMBLQ96DG6 245 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 SAMD8Q96LT4 415 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 NSMCE2Q96MF7 247 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 SIGLEC11Q96RL6 698 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 BTBD10Q9BSF8 475 aa12.76□□□□□ -0.37
UBXN4-203ENST00000416538 CGGBP1Q9UFW8 167 aaPredicted RBP12.76□□□□□ -0.37
UBXN4-203ENST00000416538 TRAV20A0A0B4J274 112 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 RGS9O75916 674 aaPredicted RBP12.75□□□□□ -0.37
UBXN4-203ENST00000416538 PNPP00491 289 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 IGHV2-70P01814 119 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 GSTM3P21266 225 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 RPS6KA3P51812 740 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 ARHGDIAP52565 204 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 TNFAIP6P98066 277 aaPredicted RBP12.75□□□□□ -0.37
UBXN4-203ENST00000416538 RFX4Q33E94 735 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 KRTAP27-1Q3LI81 207 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 SAMD4BQ5PRF9 694 aaKnown RBP12.75□□□□□ -0.37
UBXN4-203ENST00000416538 LEG1Q6P5S2 330 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 UNQ6126/PRO20091Q6UXV3 157 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 LINC00346Q8IVM7 164 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 C1orf174Q8IYL3 243 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 DEFB107AQ8IZN7 70 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.75□□□□□ -0.37
UBXN4-203ENST00000416538 SDR9C7Q8NEX9 313 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 OR9Q2Q8NGE9 314 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 ITLN1Q8WWA0 313 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 RAB39BQ96DA2 213 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 GAL3ST1Q99999 423 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 PLA2G12AQ9BZM1 189 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 NDEL1Q9GZM8 345 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 CYSLTR2Q9NS75 346 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 VNN3Q9NY84 501 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 PTTG3PQ9NZH4 202 aa12.75□□□□□ -0.37
UBXN4-203ENST00000416538 ZDHHC8Q9ULC8 765 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms