RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 PLEKHA8Q96JA3 519 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 MAGEB18Q96M61 343 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 NOX4Q9NPH5 578 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 POLE4Q9NR33 117 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 BAG5Q9UL15 447 aa12.87□□□□□ -0.35
DDX56-202ENST00000415758 MDFIC2A0A1B0GVS7 189 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 A6NIZ1 184 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 RAC2P15153 192 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 RPS2P15880 293 aaKnown RBP12.86□□□□□ -0.35
DDX56-202ENST00000415758 RAG2P55895 527 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 RAP1BP61224 184 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 RAP1AP62834 184 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 GNB2P62879 340 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 GUCY1A3Q02108 690 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 SCRN3Q0VDG4 424 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 TOP3AQ13472 1001 aaPredicted RBP12.86□□□□□ -0.35
DDX56-202ENST00000415758 ZNF181Q2M3W8 571 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 OLFML2AQ68BL7 652 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 RHOUQ7L0Q8 258 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 TMEM86BQ8N661 226 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 LRRC8CQ8TDW0 803 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 C10orf82Q8WW14 230 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 STON2Q8WXE9 905 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 NEIL1Q96FI4 390 aaPredicted RBP12.86□□□□□ -0.35
DDX56-202ENST00000415758 MMP27Q9H306 513 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 TMBIM4Q9HC24 238 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 C1RLQ9NZP8 487 aa12.86□□□□□ -0.35
DDX56-202ENST00000415758 A0A1W2PPL8 197 aa12.85□□□□□ -0.35
DDX56-202ENST00000415758 CLPSL1A2RUU4 121 aa12.85□□□□□ -0.35
DDX56-202ENST00000415758 J3QW42 95 aa12.85□□□□□ -0.35
DDX56-202ENST00000415758 SGCEO43556 437 aa12.85□□□□□ -0.35
DDX56-202ENST00000415758 CRYBA1P05813 215 aa12.85□□□□□ -0.35
DDX56-202ENST00000415758 HTR5AP47898 357 aa12.85□□□□□ -0.35
DDX56-202ENST00000415758 CTXN1P60606 82 aa12.85□□□□□ -0.35
DDX56-202ENST00000415758 RELBQ01201 579 aa12.85□□□□□ -0.35
DDX56-202ENST00000415758 FHL1Q13642 323 aa12.85□□□□□ -0.35
DDX56-202ENST00000415758 ZNF404Q494X3 552 aa12.85□□□□□ -0.35
DDX56-202ENST00000415758 ANKDD1AQ495B1 522 aa12.85□□□□□ -0.35
DDX56-202ENST00000415758 VASH1Q7L8A9 365 aaPredicted RBP12.85□□□□□ -0.35
DDX56-202ENST00000415758 PCYOX1LQ8NBM8 494 aa12.85□□□□□ -0.35
DDX56-202ENST00000415758 ZNF420Q8TAQ5 688 aaPredicted RBP12.85□□□□□ -0.35
DDX56-202ENST00000415758 ZDHHC16Q969W1 377 aa12.85□□□□□ -0.35
DDX56-202ENST00000415758 BPIFA2Q96DR5 249 aa12.85□□□□□ -0.35
DDX56-202ENST00000415758 TMEM246Q9BRR3 403 aa12.85□□□□□ -0.35
DDX56-202ENST00000415758 M0QZ24 198 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 TIMM23O14925 209 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 ANGPT2O15123 496 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 DOK2O60496 412 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 TNFRSF1BP20333 461 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 ERFP50548 548 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 RPL15P61313 204 aaKnown RBP12.84□□□□□ -0.35
DDX56-202ENST00000415758 NFYCQ13952 458 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 FIP1L1Q6UN15 594 aaKnown RBP12.84□□□□□ -0.35
DDX56-202ENST00000415758 FBXW12Q6X9E4 464 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 BRD3OSQ6XYD6 125 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 FITM2Q8N6M3 262 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 ATG16L2Q8NAA4 619 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 OR8G5Q8NG78 346 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 OR13G1Q8NGZ3 307 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 MEGF10Q96KG7 1140 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 NUDT16L1Q9BRJ7 211 aaKnown RBP12.84□□□□□ -0.35
DDX56-202ENST00000415758 EMC7Q9NPA0 242 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 POMT1Q9Y6A1 747 aa12.84□□□□□ -0.35
DDX56-202ENST00000415758 A0A1B0GWJ7 208 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 AHCYL1O43865 530 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 SHOX2O60902 331 aaPredicted RBP12.83□□□□□ -0.36
DDX56-202ENST00000415758 ZNF205O95201 554 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 IFI30P13284 250 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 OR1E2P47887 323 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 SRP9P49458 86 aaKnown RBP12.83□□□□□ -0.36
DDX56-202ENST00000415758 FGF12P61328 243 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 ST3GAL3Q11203 375 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 AQP6Q13520 282 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 GPR157Q5UAW9 335 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 NANOGP8Q6NSW7 305 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 NLRC3Q7RTR2 1065 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 IGFN1Q86VF2 1251 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 CALHM3Q86XJ0 350 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 FAM156AQ8NDB6 213 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 OR8B3Q8NGG8 313 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 FAM71F1Q96KD3 344 aaPredicted RBP12.83□□□□□ -0.36
DDX56-202ENST00000415758 OR8B2Q96RD0 313 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 CCT8L2Q96SF2 557 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 CHIAQ9BZP6 476 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 ATPIF1Q9UII2 106 aa12.83□□□□□ -0.36
DDX56-202ENST00000415758 OR6C6A6NF89 314 aa12.82□□□□□ -0.36
DDX56-202ENST00000415758 LRRC30A6NM36 301 aa12.82□□□□□ -0.36
DDX56-202ENST00000415758 PHYHO14832 338 aa12.82□□□□□ -0.36
DDX56-202ENST00000415758 TNFRSF13BO14836 293 aaPredicted RBP12.82□□□□□ -0.36
DDX56-202ENST00000415758 PIP5K1CO60331 668 aa12.82□□□□□ -0.36
DDX56-202ENST00000415758 CYB5R3P00387 301 aaPredicted RBP12.82□□□□□ -0.36
DDX56-202ENST00000415758 IFNA14P01570 189 aa12.82□□□□□ -0.36
DDX56-202ENST00000415758 SELEP16581 610 aa12.82□□□□□ -0.36
DDX56-202ENST00000415758 PITPNBP48739 271 aa12.82□□□□□ -0.36
DDX56-202ENST00000415758 RGS6P49758 472 aa12.82□□□□□ -0.36
DDX56-202ENST00000415758 LSM6P62312 80 aaKnown RBP12.82□□□□□ -0.36
DDX56-202ENST00000415758 PDCD1Q15116 288 aa12.82□□□□□ -0.36
DDX56-202ENST00000415758 WDR25Q64LD2 544 aaPredicted RBP12.82□□□□□ -0.36
DDX56-202ENST00000415758 ASPHD2Q6ICH7 369 aa12.82□□□□□ -0.36
DDX56-202ENST00000415758 BRICD5Q6PL45 260 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms