RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 RNF167Q9H6Y7 350 aa5.84□□□□□ -1.47
VPS41-204ENST00000413141 EXOSC4Q9NPD3 245 aaKnown RBP5.84□□□□□ -1.47
VPS41-204ENST00000413141 DDX28Q9NUL7 540 aaKnown RBP5.84□□□□□ -1.47
VPS41-204ENST00000413141 ASF1BQ9NVP2 202 aa5.84□□□□□ -1.47
VPS41-204ENST00000413141 TXNL4BQ9NX01 149 aaKnown RBP5.84□□□□□ -1.47
VPS41-204ENST00000413141 UPB1Q9UBR1 384 aa5.84□□□□□ -1.47
VPS41-204ENST00000413141 FBXL3Q9UKT7 428 aa5.84□□□□□ -1.47
VPS41-204ENST00000413141 SSR3Q9UNL2 185 aa5.84□□□□□ -1.47
VPS41-204ENST00000413141 R4GMQ9 66 aa5.84□□□□□ -1.47
VPS41-204ENST00000413141 ITPR1Q14643 2758 aa5.84□□□□□ -1.48
VPS41-204ENST00000413141 ALPK2Q86TB3 2170 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 TMEM212A6NML5 194 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 OR4C45A6NMZ5 311 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 ERVH48-1M5A8F1 160 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 DVL2O14641 736 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 GPRIN2O60269 458 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 SLC19A2O60779 497 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 SC5DO75845 299 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 TNFSF13O75888 250 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 TOXO94900 526 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 ZFPL1O95159 310 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 FARS2O95363 451 aaKnown RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 CNOT4O95628 575 aaKnown RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 IL18BPO95998 194 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 PNPP00491 289 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 HLA-DPB1P04440 258 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 ITGA5P08648 1049 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 CD8BP10966 210 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 SFTPCP11686 197 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 ZNF182P17025 639 aaPredicted RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 HSD11B1P28845 292 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 MPGP29372 298 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 FGF9P31371 208 aaPredicted RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 DCTDP32321 178 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 UGT2B10P36537 528 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 KIR2DL2P43627 348 aaPredicted RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 KIR3DL2P43630 455 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 MMP16P51512 607 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 CCR9P51686 369 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 FOXG1P55316 489 aaPredicted RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 SH3BGRP55822 239 aaPredicted RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 PSMA6P60900 246 aaKnown RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 RPS11P62280 158 aaKnown RBP eCLIP5.83□□□□□ -1.48
VPS41-204ENST00000413141 GRB2P62993 217 aaKnown RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 ARF1P84077 181 aaKnown RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 SCRN3Q0VDG4 424 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 FAPQ12884 760 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 FOXF2Q12947 444 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 ALKBH1Q13686 389 aaKnown RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 INSL4Q14641 139 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 RAB35Q15286 201 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 EIF2S3LQ2VIR3 472 aaKnown RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 ZNF829Q3KNS6 432 aaPredicted RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 CCDC92Q53HC0 331 aaPredicted RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 YIF1BQ5BJH7 314 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 C9orf135Q5VTT2 229 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 C22orf42Q6IC83 251 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 VWA1Q6PCB0 445 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 GFRALQ6UXV0 394 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 ZNF813Q6ZN06 617 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 TMEM91Q6ZNR0 172 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 SLC16A14Q7RTX9 510 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 SYT9Q86SS6 491 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 CATSPERDQ86XM0 798 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 PRSS35Q8N3Z0 413 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 RPRMLQ8N4K4 120 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 MS4A15Q8N5U1 240 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 NAXEQ8NCW5 288 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 GJC3Q8NFK1 279 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 IL17RDQ8NFM7 739 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 OR13C5Q8NGS8 318 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 OR2G2Q8NGZ5 317 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 OR5AK2Q8NH90 309 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 DYNC2LI1Q8TCX1 351 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 GHSRQ92847 366 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 ZFP3Q96NJ6 502 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 ATF6BQ99941 703 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 PDCD1LG2Q9BQ51 273 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 HDHD5Q9BXW7 423 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 HDHD2Q9H0R4 259 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 DCSTAMPQ9H295 470 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 KCNN2Q9H2S1 579 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 TP63Q9H3D4 680 aaPredicted RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 MOB1AQ9H8S9 216 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 G6PC2Q9NQR9 355 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 CENPMQ9NSP4 180 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 FAM206AQ9NX38 181 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 ZNF224Q9NZL3 707 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 FRRS1LQ9P0K9 344 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 ZNF835Q9Y2P0 537 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 ARHGAP21Q5T5U3 1957 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 ZZEF1O43149 2961 aa5.83□□□□□ -1.48
VPS41-204ENST00000413141 TLN1Q9Y490 2541 aaKnown RBP5.83□□□□□ -1.48
VPS41-204ENST00000413141 PIEZO2Q9H5I5 2752 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 PKD1L2Q7Z442 2459 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 A0A096LPE4 126 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 TMEM269A0A1B0GVZ9 245 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 A0A1W2PPZ6 126 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 ZNF503-AS2A6NEH8 195 aa5.82□□□□□ -1.48
VPS41-204ENST00000413141 OR6C6A6NF89 314 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms